RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SOX21Q9Y651 276 aaPredicted RBP13.39□□□□□ -0.27
GNE-202ENST00000396594 LINC00271P0C7V0 271 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 ERASQ7Z444 233 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 TRAV9-1A0A075B6T8 112 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 TRGC1P0CF51 173 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 FAM166AQ6J272 317 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 CACNG8Q8WXS5 425 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 FOXJ2Q9P0K8 574 aa13.39□□□□□ -0.27
GNE-202ENST00000396594 RD3LP0DJH9 198 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 LINC00312Q9Y6C7 94 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 SIRT4Q9Y6E7 314 aaPredicted RBP13.38□□□□□ -0.27
GNE-202ENST00000396594 A6NDN8 102 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 C4orf51C9J302 202 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 ZNF253O75346 499 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 KLF7O75840 302 aaPredicted RBP13.38□□□□□ -0.27
GNE-202ENST00000396594 OR10J1P30954 320 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 UNQ5815/PRO19632Q6UWF5 114 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 TMEM37Q8WXS4 190 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 DNAJC4Q9NNZ3 241 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 ZMAT5Q9UDW3 170 aaKnown RBP13.38□□□□□ -0.27
GNE-202ENST00000396594 NAGKQ9UJ70 344 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 LRRC75AQ8NAA5 344 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 C2CD4CQ8TF44 421 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 TNFRSF19Q9NS68 423 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 H3BQ15 152 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 CCL1P22362 96 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 CD40P25942 277 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 ATP5J2P56134 94 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 CMC4P56277 68 aaPredicted RBP13.38□□□□□ -0.27
GNE-202ENST00000396594 ACP7Q6ZNF0 438 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 RNASEH2CQ8TDP1 164 aaKnown RBP13.38□□□□□ -0.27
GNE-202ENST00000396594 FAM222BQ8WU58 562 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 TMEM106BQ9NUM4 274 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 ZFP30Q9Y2G7 519 aa13.38□□□□□ -0.27
GNE-202ENST00000396594 IL11P20809 199 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 HERPUD1Q15011 391 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 C17orf82Q86X59 251 aaPredicted RBP13.37□□□□□ -0.27
GNE-202ENST00000396594 FGFRL1Q8N441 504 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 SLC25A38Q96DW6 304 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 RSRP1Q9BUV0 290 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 IFT22Q9H7X7 185 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 VENTXO95231 258 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 CELA2AP08217 269 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 ACSF3Q4G176 576 aaPredicted RBP13.37□□□□□ -0.27
GNE-202ENST00000396594 UFC1Q9Y3C8 167 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 E9PLN8 166 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 CD8AP01732 235 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 LINC00869P0C866 280 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 EGR4Q05215 589 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 OR51G1Q8NGK1 321 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 HIST1H2BAQ96A08 127 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 SPSB4Q96A44 273 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 C12orf57Q99622 126 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 VKORC1Q9BQB6 163 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 SEMA5BQ9P283 1151 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 PPOXP50336 477 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 ZNF385CQ66K41 422 aaPredicted RBP13.37□□□□□ -0.27
GNE-202ENST00000396594 SLC16A13Q7RTY0 426 aa13.37□□□□□ -0.27
GNE-202ENST00000396594 TMEM238LA0A1B0GVL6 79 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 A6NJY4 79 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 VAMP3Q15836 100 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 SIGIRRQ6IA17 410 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 OR5AU1Q8NGC0 362 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 SSMEM1Q8WWF3 244 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 NRTNQ99748 197 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 TMEM70Q9BUB7 260 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 MPZP25189 248 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 P2RY4P51582 365 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 PRSS53Q2L4Q9 553 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 SPANXN1Q5VSR9 72 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 C16orf92Q96LL3 132 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 TMEM74BQ9NUR3 256 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 DPM3Q9P2X0 92 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 C7orf77A4D0Y5 90 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 RBFOX2O43251 390 aaKnown RBP eCLIP13.36□□□□□ -0.27
GNE-202ENST00000396594 PRSS1P07477 247 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 MEF2BQ02080 365 aaPredicted RBP13.36□□□□□ -0.27
GNE-202ENST00000396594 RSPO4Q2I0M5 234 aaPredicted RBP13.36□□□□□ -0.27
GNE-202ENST00000396594 IGKV3D-15A0A087WSY6 115 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 MARCH11A6NNE9 402 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 SCGB1C2P0DMR2 95 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 SNRPD3P62318 126 aaKnown RBP13.36□□□□□ -0.27
GNE-202ENST00000396594 TMEM187Q14656 261 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 DMRTC1Q5HYR2 192 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 Q6AWC8 147 aa13.36□□□□□ -0.27
GNE-202ENST00000396594 REPIN1Q9BWE0 567 aaKnown RBP13.36□□□□□ -0.27
GNE-202ENST00000396594 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.35□□□□□ -0.27
GNE-202ENST00000396594 FDCSPQ8NFU4 85 aa13.35□□□□□ -0.27
GNE-202ENST00000396594 GPR146Q96CH1 333 aa13.35□□□□□ -0.27
GNE-202ENST00000396594 ANKRD36A6QL64 1941 aa13.35□□□□□ -0.27
GNE-202ENST00000396594 FGF8P55075 233 aaPredicted RBP13.35□□□□□ -0.27
GNE-202ENST00000396594 SNAI3Q3KNW1 292 aa13.35□□□□□ -0.27
GNE-202ENST00000396594 IL17BQ9UHF5 180 aa13.35□□□□□ -0.27
GNE-202ENST00000396594 FABP4P15090 132 aa13.35□□□□□ -0.27
GNE-202ENST00000396594 HIST3H3Q16695 136 aa13.35□□□□□ -0.27
GNE-202ENST00000396594 FAM24BQ8N5W8 94 aa13.35□□□□□ -0.27
GNE-202ENST00000396594 TCF19Q9Y242 345 aa13.35□□□□□ -0.27
GNE-202ENST00000396594 OOSP1A8MZH6 123 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms