RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PRSS12P56730 875 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 SNRPNP63162 240 aaKnown RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 NR2C2APQ86WQ0 139 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 NDFIP1Q9BT67 221 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ELF5Q9UKW6 265 aaPredicted RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 PSG11Q9UQ72 335 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 LEUTXA8MZ59 168 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM50BP56557 158 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 Q0VFX4 171 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 RSPO4Q2I0M5 234 aaPredicted RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 PDPNQ86YL7 162 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 FGFRL1Q8N441 504 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 KDF1Q8NAX2 398 aaPredicted RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 OR1L4Q8NGR5 311 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 SLC25A28Q96A46 364 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 R3HDM4Q96D70 268 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 MEGF10Q96KG7 1140 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 GCM1Q9NP62 436 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 OSGIN2Q9Y236 505 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF257Q9Y2Q1 563 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 COL6A5A8TX70 2615 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 PDE6DO43924 150 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 GLI4P10075 376 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 CD80P33681 288 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 STARD4Q96DR4 205 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ATMQ13315 3056 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 TEP1Q99973 2627 aaKnown RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 FAM221AA4D161 298 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 SPP1P10451 314 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 AGAP20933 346 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 DTD1Q8TEA8 209 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 C19orf12Q9NSK7 152 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 TIMM9Q9Y5J7 89 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ATP6V1G2-DDX39BF2Z307 99 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 J3QR06 171 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 PITX3O75364 302 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 BCL3P20749 454 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ZP3P21754 424 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ZP1P60852 638 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 PAX5Q02548 391 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 HES1Q14469 280 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ASPHD2Q6ICH7 369 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 RTN4RL2Q86UN3 420 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 RNF5Q99942 180 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 HES7Q9BYE0 225 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 IGHV1-69-2A0A0G2JMI3 117 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 KBTBD11-OT1A0A1B0GTJ5 212 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SULT1A2P50226 295 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 H2BFSP57053 126 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 AESQ08117 197 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF497Q6ZNH5 498 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 PAQR4Q8N4S7 273 aaPredicted RBP2.87□□□□□ -1.95
VPS13C-203ENST00000395896 BPIFCQ8NFQ6 507 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 PERPQ96FX8 193 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 MBNL3Q9NUK0 354 aaKnown RBP2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SMIM15Q7Z3B0 74 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 STPG3Q8N7X2 389 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 RFESDQ8TAC1 157 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 GATAD1Q8WUU5 269 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 CALYQ9NYX4 217 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SLC25A15Q9Y619 301 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 FOXL2P58012 376 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SP6Q3SY56 376 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 OR11H7Q8NGC8 314 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 MRGPRFQ96AM1 343 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SMIM8Q96KF7 97 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 TOLLIPQ9H0E2 274 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM250H0YL14 139 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 FAM106CPP0CH98 169 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 GATA3P23771 443 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SLC38A11Q08AI6 406 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM106BQ9NUM4 274 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 FBXL17Q9UF56 701 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 A0A0G2JMM0 328 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 A0A1W2PPB8 328 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 A0A1W2PRS3 328 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 FBLL1A6NHQ2 334 aaKnown RBP2.87□□□□□ -1.95
VPS13C-203ENST00000395896 KIR3DP1A8MWS1 328 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 MAS1LP35410 378 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 FBXL19-AS1Q494R0 122 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 OR52B4Q8NGK2 314 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 CLEC5AQ9NY25 188 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 WASHC3Q9Y3C0 194 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 H7BYZ3 331 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 NUPL2O15504 423 aaKnown RBP2.87□□□□□ -1.95
VPS13C-203ENST00000395896 ENSAO43768 121 aaKnown RBP2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SRSF10O75494 262 aaKnown RBP2.87□□□□□ -1.95
VPS13C-203ENST00000395896 ADAP1O75689 374 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 IGLV1-44P01699 117 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 RBP4P02753 201 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 CEACAM8P31997 349 aaPredicted RBP2.87□□□□□ -1.95
VPS13C-203ENST00000395896 POLR2GP62487 172 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS13C-203ENST00000395896 PMP22Q01453 160 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SLC35E3Q7Z769 313 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF429Q86V71 674 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SLC24A4Q8NFF2 622 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 CABLES2Q9BTV7 478 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 MUC4Q99102 2169 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SIGLEC5O15389 551 aa2.87□□□□□ -1.95
VPS13C-203ENST00000395896 SIX6O95475 246 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms