RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 Q8N6K4 173 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 OR5H2Q8NGV7 314 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 GIMAP1Q8WWP7 306 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 S1PR3Q99500 378 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 ZNF747Q9BV97 191 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 RAB3DO95716 219 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 PMP2P02689 132 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 OR5H8P0DN80 308 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 NFYAP23511 347 aaPredicted RBP13.18□□□□□ -0.3
CXCL1-201ENST00000395761 GPR12P47775 334 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 RFX2P48378 723 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 LINC00205P59089 165 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 MEF2DQ14814 521 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 ABCA11PQ4W5N1 156 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 RNASE10Q5GAN6 216 aaKnown RBP13.18□□□□□ -0.3
CXCL1-201ENST00000395761 Q8N2B8 174 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 DRAXINQ8NBI3 349 aaPredicted RBP13.18□□□□□ -0.3
CXCL1-201ENST00000395761 OR2T10Q8NGZ9 312 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 WFDC12Q8WWY7 111 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 AKR1E2Q96JD6 320 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 RITA1Q96K30 269 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 GHITMQ9H3K2 345 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 ZNF221Q9UK13 617 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 MOB4Q9Y3A3 225 aa13.18□□□□□ -0.3
CXCL1-201ENST00000395761 MOSP00540 346 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 FAUP35544 74 aaKnown RBP13.17□□□□□ -0.3
CXCL1-201ENST00000395761 INPP1P49441 399 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 F2RL1P55085 397 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 IFITM3Q01628 133 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 TMEM95Q3KNT9 176 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 ZNF57Q68EA5 555 aaPredicted RBP13.17□□□□□ -0.3
CXCL1-201ENST00000395761 ZNF660Q6AZW8 331 aaPredicted RBP13.17□□□□□ -0.3
CXCL1-201ENST00000395761 FAM71F2Q6NXP2 309 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 C11orf88Q6PI97 169 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 ARRDC1Q8N5I2 433 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 OR2T6Q8NHC8 308 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 C5orf30Q96GV9 206 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 C7orf50Q9BRJ6 194 aaKnown RBP13.17□□□□□ -0.3
CXCL1-201ENST00000395761 OR2D2Q9H210 308 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 HRASLSQ9HDD0 168 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 PALMDQ9NP74 551 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 PLSCR3Q9NRY6 295 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 SERTAD4Q9NUC0 356 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 EHFQ9NZC4 300 aa13.17□□□□□ -0.3
CXCL1-201ENST00000395761 NAP1L6A6NFF2 107 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 M0QYG6 137 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 PLA2G10O15496 165 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 TUSC2O75896 110 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 ZNF735P0CB33 412 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 C5orf56Q8N8D9 126 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 ZNF383Q8NA42 475 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 OR4C16Q8NGL9 310 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 TINAGL1Q9GZM7 467 aaPredicted RBP13.16□□□□□ -0.3
CXCL1-201ENST00000395761 SDHAF2Q9NX18 166 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 GAB2Q9UQC2 676 aa13.16□□□□□ -0.3
CXCL1-201ENST00000395761 RBM7Q9Y580 266 aaKnown RBP13.16□□□□□ -0.3
CXCL1-201ENST00000395761 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
CXCL1-201ENST00000395761 M0R1X1 148 aa13.15□□□□□ -0.3
CXCL1-201ENST00000395761 IFNA6P05013 189 aa13.15□□□□□ -0.3
CXCL1-201ENST00000395761 C9orf152Q5JTZ5 239 aa13.15□□□□□ -0.3
CXCL1-201ENST00000395761 TMEM17Q86X19 198 aa13.15□□□□□ -0.3
CXCL1-201ENST00000395761 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.15□□□□□ -0.3
CXCL1-201ENST00000395761 OR4D10Q8NGI6 311 aa13.15□□□□□ -0.3
CXCL1-201ENST00000395761 OR6F1Q8NGZ6 308 aa13.15□□□□□ -0.3
CXCL1-201ENST00000395761 SLC2A8Q9NY64 477 aa13.15□□□□□ -0.3
CXCL1-201ENST00000395761 OR2W1Q9Y3N9 320 aa13.15□□□□□ -0.3
CXCL1-201ENST00000395761 IGKV1D-13A0A0B4J2D9 117 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 CENPXA8MT69 81 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 DISC1C4P0D8 188 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 H0YJW9 148 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 M0QZK8 103 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 IGKV1-13P0DP09 117 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 VSIG10L2P0DP72 767 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 CNTFRP26992 372 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 FCGR2CP31995 323 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 TSPAN5P62079 268 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 ASAH1Q13510 395 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 SHISA2Q6UWI4 295 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 Q8N9W7 124 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 OR5AN1Q8NGI8 311 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 TBC1D24Q9ULP9 559 aa13.14□□□□□ -0.31
CXCL1-201ENST00000395761 FGF16O43320 207 aa13.13□□□□□ -0.31
CXCL1-201ENST00000395761 AADACP22760 399 aa13.13□□□□□ -0.31
CXCL1-201ENST00000395761 VDAC2P45880 294 aaPredicted RBP13.13□□□□□ -0.31
CXCL1-201ENST00000395761 LUMP51884 338 aaPredicted RBP13.13□□□□□ -0.31
CXCL1-201ENST00000395761 ARSJQ5FYB0 599 aaPredicted RBP13.13□□□□□ -0.31
CXCL1-201ENST00000395761 HIST2H2BDQ6DRA6 164 aa13.13□□□□□ -0.31
CXCL1-201ENST00000395761 KLHDC1Q8N7A1 406 aa13.13□□□□□ -0.31
CXCL1-201ENST00000395761 TERB2Q8NHR7 220 aa13.13□□□□□ -0.31
CXCL1-201ENST00000395761 PRRT1Q99946 306 aa13.13□□□□□ -0.31
CXCL1-201ENST00000395761 ZNF2Q9BSG1 426 aaPredicted RBP13.13□□□□□ -0.31
CXCL1-201ENST00000395761 OR5H14A6NHG9 310 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 LINC01548A6NM66 108 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 H7C2Y5 167 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 LYRM1O43325 122 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 PPYP01298 95 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 IGLV2-14P01704 120 aa13.12□□□□□ -0.31
CXCL1-201ENST00000395761 MC5RP33032 325 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms