RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 C12orf4Q9NQ89 552 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 STEAP1Q9UHE8 339 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 RAB26Q9ULW5 256 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 IGHV3-72A0A0B4J1Y9 119 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 F5H697 171 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 NBR2O15453 112 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 VDAC1P21796 283 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 MC5RP33032 325 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 PPP1CCP36873 323 aaKnown RBP4.78□□□□□ -1.64
PTPN20-208ENST00000395727 F2RL1P55085 397 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 UCP3P55916 312 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 TMEM50BP56557 158 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 GABARAPL2P60520 117 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 ACTBP60709 375 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 HLA-DRB3P79483 266 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 FABP5Q01469 135 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 MMDQ15546 238 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 SRSF7Q16629 238 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPN20-208ENST00000395727 C5orf64Q2M2E5 130 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 OR10K2Q6IF99 312 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 FAM53AQ6NSI3 398 aaPredicted RBP4.78□□□□□ -1.64
PTPN20-208ENST00000395727 Q6ZS49 121 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 ZNF367Q7RTV3 350 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.78□□□□□ -1.64
PTPN20-208ENST00000395727 KLHL30-AS1Q8NEE0 82 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 OR52L2PQ8NGH6 319 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 OR56B1Q8NGI3 324 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 OR10V1Q8NGI7 309 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 DPF1Q92782 380 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 UBE2E2Q96LR5 201 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 HSPB9Q9BQS6 159 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 NICN1Q9BSH3 213 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 FAAP24Q9BTP7 215 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 PLGRKTQ9HBL7 147 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 PLEKHJ1Q9NW61 149 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 NDUFB11Q9NX14 153 aa4.78□□□□□ -1.64
PTPN20-208ENST00000395727 ZNF107Q9UII5 783 aaPredicted RBP4.78□□□□□ -1.64
PTPN20-208ENST00000395727 IGHV7-81A0A0B4J1V7 117 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 LINC01548A6NM66 108 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 ANKRD65E5RJM6 399 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 H0YJW9 148 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 K7EIL1 84 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 CCL24O00175 119 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 PDCD5O14737 125 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 SOCS1O15524 211 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 TRIAP1O43715 76 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 RAMP3O60896 148 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 ZBTB25P24278 435 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 CALRP27797 417 aaKnown RBP4.77□□□□□ -1.65
PTPN20-208ENST00000395727 SERPINB10P48595 397 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 INSL3P51460 131 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 LUMP51884 338 aaPredicted RBP4.77□□□□□ -1.65
PTPN20-208ENST00000395727 RPS25P62851 125 aaKnown RBP4.77□□□□□ -1.65
PTPN20-208ENST00000395727 ARL6IP1Q15041 203 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 RAB11BQ15907 218 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 ZNF660Q6AZW8 331 aaPredicted RBP4.77□□□□□ -1.65
PTPN20-208ENST00000395727 IZUMO2Q6UXV1 221 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 MINDY2Q8NBR6 621 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 OR4A4PQ8NGN8 299 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 TMEM203Q969S6 136 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 FAM3DQ96BQ1 224 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 CYYR1Q96J86 154 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 KCTD7Q96MP8 289 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 CABLES2Q9BTV7 478 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 MRPL20Q9BYC9 149 aaKnown RBP4.77□□□□□ -1.65
PTPN20-208ENST00000395727 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 OR51J1Q9H342 316 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 KCNK15Q9H427 330 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 Q9N2K0 584 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPN20-208ENST00000395727 AK3Q9UIJ7 227 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 GAB2Q9UQC2 676 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 V9GY05 133 aa4.77□□□□□ -1.65
PTPN20-208ENST00000395727 TRAV41A0A0B4J266 112 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 TRDV1A0A1B0GX56 115 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 IFITM5A6NNB3 132 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 I3L521 148 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 MFNGO00587 321 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 RRHO14718 337 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 ARPC1BO15143 372 aaKnown RBP4.76□□□□□ -1.65
PTPN20-208ENST00000395727 ATP6V0E1O15342 81 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 MPPED1O15442 326 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 DENRO43583 198 aaKnown RBP4.76□□□□□ -1.65
PTPN20-208ENST00000395727 PROP1O75360 226 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 BRI3O95415 125 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 PRB2P02812 416 aaPredicted RBP4.76□□□□□ -1.65
PTPN20-208ENST00000395727 HSMCR30P0CW71 290 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 CT45A6P0DMU7 189 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 CT45A5P0DMU8 189 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 CT45A7P0DMV0 189 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 FGF9P31371 208 aaPredicted RBP4.76□□□□□ -1.65
PTPN20-208ENST00000395727 OR3A3P47888 321 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 KRTAP10-11P60412 298 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 KIAA0141Q14154 515 aaPredicted RBP4.76□□□□□ -1.65
PTPN20-208ENST00000395727 SSX1Q16384 188 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 C2orf76Q3KRA6 126 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 AKIRIN2Q53H80 203 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 PLAC9Q5JTB6 97 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 C9orf66Q5T8R8 295 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 UBE2UQ5VVX9 321 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms