RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 GNB1P62873 340 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 OR10P1Q8NGE3 313 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 OR52L2PQ8NGH6 319 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 ACY3Q96HD9 319 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 CDIPTO14735 213 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 SLC25A6P12236 298 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 IMMP1LQ96LU5 166 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 PYGO2Q9BRQ0 406 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 TMEM208Q9BTX3 173 aa12.06□□□□□ -0.48
CLIP2-203ENST00000395060 ODAMA1E959 279 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 ANKRD30BLA7E2S9 258 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 KLF7O75840 302 aaPredicted RBP12.05□□□□□ -0.48
CLIP2-203ENST00000395060 DIRC2Q96SL1 478 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 HSPB9Q9BQS6 159 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 SF3B5Q9BWJ5 86 aaKnown RBP12.05□□□□□ -0.48
CLIP2-203ENST00000395060 TRAV34A0A0B4J273 112 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 OR2H2O95918 312 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 COX5AP20674 150 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 OR3A1P47881 315 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 ACOT6Q3I5F7 207 aaPredicted RBP12.05□□□□□ -0.48
CLIP2-203ENST00000395060 LBHQ53QV2 105 aaPredicted RBP12.05□□□□□ -0.48
CLIP2-203ENST00000395060 LINC01551Q86U37 167 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 BEND2Q8NDZ0 799 aa12.05□□□□□ -0.48
CLIP2-203ENST00000395060 LIN7CQ9NUP9 197 aaKnown RBP12.05□□□□□ -0.48
CLIP2-203ENST00000395060 C17orf98A8MV24 154 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 CDC34P49427 236 aaPredicted RBP12.04□□□□□ -0.48
CLIP2-203ENST00000395060 KIAA1644Q3SXP7 199 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 VKORC1L1Q8N0U8 176 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 CMTM2Q8TAZ6 248 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 DTD1Q8TEA8 209 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 NPCDR1Q9BY65 106 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 PILRBQ9UKJ0 227 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 NUFIP2Q7Z417 695 aaKnown RBP12.04□□□□□ -0.48
CLIP2-203ENST00000395060 TGIF2LYQ8IUE0 185 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 SAMD10Q9BYL1 202 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 A0A1W2PPV4 95 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 NXPH2O95156 264 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 ALKBH6Q3KRA9 238 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 DMRTA1Q5VZB9 504 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 PMS2CLQ68D20 193 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 AGBL5Q8NDL9 886 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 SSMEM1Q8WWF3 244 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 PRDM14Q9GZV8 571 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 RYDENQ9NUL5 291 aaKnown RBP12.04□□□□□ -0.48
CLIP2-203ENST00000395060 ZNF391Q9UJN7 358 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 GOLT1BQ9Y3E0 138 aa12.04□□□□□ -0.48
CLIP2-203ENST00000395060 KRTDAPP60985 99 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 AESQ08117 197 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 OR5I1Q13606 314 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 DNLZQ5SXM8 178 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 ZNF826PQ6ZT77 177 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 Q6ZWC4 215 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 BAGE3Q86Y29 109 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 BAGE2Q86Y30 109 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 CISD2Q8N5K1 135 aaKnown RBP12.03□□□□□ -0.48
CLIP2-203ENST00000395060 RBM14Q96PK6 669 aaKnown RBP12.03□□□□□ -0.48
CLIP2-203ENST00000395060 TRBV20OR9-2A0A075B6H5 130 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 SCO2A0A1W2PP80 73 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 TMEM250H0YL14 139 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 WNT9BO14905 357 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 TOX3O15405 576 aaPredicted RBP12.03□□□□□ -0.48
CLIP2-203ENST00000395060 BTF3P20290 206 aaKnown RBP12.03□□□□□ -0.48
CLIP2-203ENST00000395060 TNFSF10P50591 281 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 TRIM61Q5EBN2 209 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 DBX2Q6ZNG2 339 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 SPSB4Q96A44 273 aa12.03□□□□□ -0.48
CLIP2-203ENST00000395060 GGCTO75223 188 aaKnown RBP12.02□□□□□ -0.48
CLIP2-203ENST00000395060 SERF1AO75920 110 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 KITLGP21583 273 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 SRD5A2P31213 254 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 ZNF90Q03938 601 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 COA6Q5JTJ3 125 aaKnown RBP12.02□□□□□ -0.48
CLIP2-203ENST00000395060 C1orf194Q5T5A4 169 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 ALKBH2Q6NS38 261 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 MRGPRDQ8TDS7 321 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 LSM10Q969L4 123 aaKnown RBP12.02□□□□□ -0.48
CLIP2-203ENST00000395060 APOBEC3DQ96AK3 386 aaPredicted RBP12.02□□□□□ -0.48
CLIP2-203ENST00000395060 ANAPC16Q96DE5 110 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 WDYHV1Q96HA8 205 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 TMEM147Q9BVK8 224 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 CFAP47Q6ZTR5 3102 aa12.02□□□□□ -0.48
CLIP2-203ENST00000395060 BDP1A6H8Y1 2624 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 MDFIC2A0A1B0GVS7 189 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 MT-CO3P00414 261 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 CCKARP32238 428 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 TCL1AP56279 114 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 Q0VFX4 171 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 HLA-DRB5Q30154 266 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 TMEM14EPQ6UXP3 125 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 F6UZH7 168 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 RAB4BP61018 213 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 GNG3P63215 75 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 KRTAP27-1Q3LI81 207 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 Q6ZS49 121 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 Q6ZVH6 145 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 ATOH7Q8N100 152 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 AGMATQ9BSE5 352 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 DCTN5Q9BTE1 182 aa12.02□□□□□ -0.49
CLIP2-203ENST00000395060 SPTBN2O15020 2390 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 342.3 ms