RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 A0A1W2PPV4 95 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 TMEM218A2RU14 115 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 ATG12O94817 140 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 IGHV1-46P01743 117 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 ZP3P21754 424 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 FGF7P21781 194 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 UBE2KP61086 200 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 PEA15Q15121 130 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 HFEQ30201 348 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 LHX4Q969G2 390 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 P2RY1P47900 373 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM209AQ5JX71 171 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 ABHD12Q8N2K0 398 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 DTD1Q8TEA8 209 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 TMEM171Q8WVE6 324 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 RPUSD4Q96CM3 377 aaKnown RBP13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 C14orf79Q96F83 325 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 MYO9AB2RTY4 2548 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 C1QTNF9BB2RNN3 333 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 C1QTNF9P0C862 333 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 STUMQ69YW2 141 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 HIPK2Q9H2X6 1198 aa13.29□□□□□ -0.28
SMARCD1-202ENST00000394963 IGKV1D-17A0A075B6S4 117 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 OR8U8P0C7N1 319 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 C1orf87Q8N0U7 546 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 CYTL1Q9NRR1 136 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 MYOD1P15172 320 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 COX5AP20674 150 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 MPZP25189 248 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 OR10Z1Q8NGY1 313 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 LILRB1Q8NHL6 650 aaPredicted RBP13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 RHOVQ96L33 236 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 ZNF665Q9H7R5 613 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 PATZ1Q9HBE1 687 aaKnown RBP13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 OR6C3Q9NZP0 311 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 ONECUT1Q9UBC0 465 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 PPIAL4EA0A075B759 164 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 PPIAL4DF5H284 164 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 PPIAL4FP0DN26 164 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 HLA-GP17693 338 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 UCP1P25874 307 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 BOD1Q96IK1 185 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 C18orf12Q96KH6 178 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 PPIAL4AQ9Y536 164 aa13.28□□□□□ -0.28
SMARCD1-202ENST00000394963 MARCH11A6NNE9 402 aa13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM157AC9JC47 383 aa13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 SLC31A2O15432 143 aa13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 SCAF4O95104 1147 aaKnown RBP13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 UCP3P55916 312 aa13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 LINC00596Q86U02 117 aa13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 PUSL1Q8N0Z8 303 aaKnown RBP13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 C1orf162Q8NEQ5 155 aaPredicted RBP13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 PHYHIPLQ96FC7 376 aa13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 DHRS9Q9BPW9 319 aa13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 FAM117AQ9C073 453 aa13.27□□□□□ -0.28
SMARCD1-202ENST00000394963 SNAPINO95295 136 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 TMEM50AO95807 157 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 HOXB1P14653 301 aaPredicted RBP13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 LRRC10Q5BKY1 277 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 NECAP1Q8NC96 275 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 DFFBO76075 338 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 ZNF146Q15072 292 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 MOB3BQ86TA1 216 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 ZNF645Q8N7E2 425 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 ACY3Q96HD9 319 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 RBKSQ9H477 322 aa13.27□□□□□ -0.29
SMARCD1-202ENST00000394963 ZNF787Q6DD87 383 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 OR5D13Q8NGL4 314 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 MMP26Q9NRE1 261 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 LINC00473A8K010 186 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 NPBWR1P48145 328 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 TLE4Q04727 773 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 OR4C12Q96R67 309 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 AIFM2Q9BRQ8 373 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 PRB4P10163 310 aaPredicted RBP13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 KCNJ3P48549 501 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 IGFBPL1Q8WX77 278 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 SNX22Q96L94 193 aa13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 TNRC6BQ9UPQ9 1833 aaKnown RBP13.26□□□□□ -0.29
SMARCD1-202ENST00000394963 TRAV38-1A0A0B4J264 116 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 IGFL2Q6UWQ7 119 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 RAB40CQ96S21 281 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 SIRT7Q9NRC8 400 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 SLC35D1Q9NTN3 355 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 MMP24Q9Y5R2 645 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 TACC2O95359 2948 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 ABCA2Q9BZC7 2435 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 hADV38S2A0JD32 116 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 IGKV1-5P01602 117 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 CD24P25063 80 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 TIMP3P35625 211 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 C11orf53Q8IXP5 236 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 QTRT1Q9BXR0 403 aaKnown RBP13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 PLSCR2Q9NRY7 297 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 WSB1Q9Y6I7 421 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 KRTAP27-1Q3LI81 207 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 UTF1Q5T230 341 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms