RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 C19orf12Q9NSK7 152 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 CLEC18AA5D8T8 446 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 C9JQL5 133 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 IFNA5P01569 189 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 THBDP07204 575 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 ADCYAP1P18509 176 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 GRNP28799 593 aaKnown RBP9.26□□□□□ -0.93
TCOF1-203ENST00000394269 LYG1Q8N1E2 194 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 CLEC18CQ8NCF0 446 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 SCGB1C1Q8TD33 95 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 SAP30LQ9HAJ7 183 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 RNF115Q9Y4L5 304 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 RAB19A4D1S5 217 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 K7N7A8 449 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 SLC31A2O15432 143 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 ATG12O94817 140 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 SFTA3P0C7M3 94 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 TMPRSS3P57727 454 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 UBE2KP61086 200 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 PRB3Q04118 309 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-203ENST00000394269 C1orf174Q8IYL3 243 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 PUSL1Q8N0Z8 303 aaKnown RBP9.25□□□□□ -0.93
TCOF1-203ENST00000394269 EIF4E3Q8N5X7 224 aaKnown RBP9.25□□□□□ -0.93
TCOF1-203ENST00000394269 PRR7Q8TB68 274 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 SAT2Q96F10 170 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-203ENST00000394269 NKX6-2Q9C056 277 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-203ENST00000394269 CACFD1Q9UGQ2 172 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 HIVEP3Q5T1R4 2406 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 ASH1LQ9NR48 2969 aaKnown RBP9.25□□□□□ -0.93
TCOF1-203ENST00000394269 IGLV3-9A0A075B6K5 115 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 NPIPB11E5RHQ5 1161 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 CCL21O00585 134 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 ACAA1P09110 424 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-203ENST00000394269 OR13C7P0DN81 318 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 SPP1P10451 314 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 ELLP55199 621 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-203ENST00000394269 CASP6P55212 293 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 AKR1C8PQ5T2L2 129 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 CD300LFQ8TDQ1 290 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 LURAP1Q96LR2 239 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 CALYQ9NYX4 217 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 IL19Q9UHD0 177 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 DSCAMO60469 2012 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 DUXBA0A1W2PPF3 345 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 HMGB3O15347 200 aaKnown RBP9.25□□□□□ -0.93
TCOF1-203ENST00000394269 OPN1MWP04001 364 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 SEC11BP0C7V7 166 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 DANCRP0C864 163 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 OPN1MW2P0DN77 364 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 OPN1MW3P0DN78 364 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 ARL16Q0P5N6 197 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 HAGHQ16775 308 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 MORN2Q502X0 79 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 IL22RA2Q969J5 263 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 ABCA1O95477 2261 aa9.25□□□□□ -0.93
TCOF1-203ENST00000394269 TRGV10A0A0A0MS01 117 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 PCP4L1A6NKN8 68 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 LYNX1G3V0Z9 82 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 C15orf65H3BRN8 121 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 ZG16O60844 167 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 LYNX1P0DP58 116 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 CCL20P78556 96 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 CBLN2Q8IUK8 224 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 IQCF2Q8IXL9 164 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 ODF3L1Q8IXM7 274 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 RAB40CQ96S21 281 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 GINS3Q9BRX5 216 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 RBKSQ9H477 322 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 DNASE2O00115 360 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-203ENST00000394269 PLAUP00749 431 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 CTRB1P17538 263 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 SULT1A1P50225 295 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 BRWD1-AS2P59051 145 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 MSMO1Q15800 293 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 CTRB2Q6GPI1 263 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 SVBPQ8N300 66 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 EDARADDQ8WWZ3 215 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 MALRD1Q5VYJ5 2156 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 UBE2L5PA0A1B0GUS4 154 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 TOR1AO14656 332 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 MMP23AO75900 390 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 ADH4P08319 380 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 LCN15Q6UWW0 184 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 BTNL8Q6UX41 500 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 ETV3LQ6ZN32 361 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 RARRES2Q99969 163 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 AGMATQ9BSE5 352 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 PARP11Q9NR21 331 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 MMP24Q9Y5R2 645 aa9.24□□□□□ -0.93
TCOF1-203ENST00000394269 LRRC30A6NM36 301 aa9.23□□□□□ -0.93
TCOF1-203ENST00000394269 MARCH11A6NNE9 402 aa9.23□□□□□ -0.93
TCOF1-203ENST00000394269 C17orf100A8MU93 164 aa9.23□□□□□ -0.93
TCOF1-203ENST00000394269 M0R036 132 aa9.23□□□□□ -0.93
TCOF1-203ENST00000394269 PITX3O75364 302 aa9.23□□□□□ -0.93
TCOF1-203ENST00000394269 TNFRSF1AP19438 455 aa9.23□□□□□ -0.93
TCOF1-203ENST00000394269 GUK1Q16774 197 aa9.23□□□□□ -0.93
TCOF1-203ENST00000394269 PRAMEF5Q5TYX0 476 aa9.23□□□□□ -0.93
TCOF1-203ENST00000394269 IL34Q6ZMJ4 242 aa9.23□□□□□ -0.93
TCOF1-203ENST00000394269 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.23□□□□□ -0.93
TCOF1-203ENST00000394269 ELOVL5Q9NYP7 299 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms