RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ZNF680Q8NEM1 530 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 OR10X1Q8NGY0 326 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 PATZ1Q9HBE1 687 aaKnown RBP7.08□□□□□ -1.28
TDP1-203ENST00000393454 ONECUT1Q9UBC0 465 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 GAB2Q9UQC2 676 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 NSG2Q9Y328 171 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 FAM208BQ5VWN6 2430 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 CLEC18AA5D8T8 446 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 F5H0A9 414 aaPredicted RBP7.08□□□□□ -1.28
TDP1-203ENST00000393454 OVOL3O00110 214 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 TOR1AO14656 332 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 SPDEFO95238 335 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 IGHV1-8P0DP01 117 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 SLC25A6P12236 298 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 PVALBP20472 110 aaPredicted RBP7.08□□□□□ -1.28
TDP1-203ENST00000393454 RPL12P30050 165 aaKnown RBP7.08□□□□□ -1.28
TDP1-203ENST00000393454 THBS3P49746 956 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 SP5Q6BEB4 398 aaPredicted RBP7.08□□□□□ -1.28
TDP1-203ENST00000393454 Q6ZRM9 215 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 H2BFWTQ7Z2G1 175 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 ODF3L1Q8IXM7 274 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 ZNF525Q8N782 197 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 CLEC18CQ8NCF0 446 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 ARPC5LQ9BPX5 153 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 SSBP3Q9BWW4 388 aaPredicted RBP7.08□□□□□ -1.28
TDP1-203ENST00000393454 ZNF471Q9BX82 626 aaPredicted RBP7.08□□□□□ -1.28
TDP1-203ENST00000393454 MMP24Q9Y5R2 645 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 SESN1Q9Y6P5 492 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 KMT2BQ9UMN6 2715 aaPredicted RBP7.08□□□□□ -1.28
TDP1-203ENST00000393454 J3QR06 171 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 RBMXL2O75526 392 aaKnown RBP7.07□□□□□ -1.28
TDP1-203ENST00000393454 HPRT1P00492 218 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 CFDP00746 253 aaPredicted RBP7.07□□□□□ -1.28
TDP1-203ENST00000393454 HKR1P10072 659 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 KIR2DS2P43631 304 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 PRB3Q04118 309 aaPredicted RBP7.07□□□□□ -1.28
TDP1-203ENST00000393454 EXOSC2Q13868 293 aaKnown RBP7.07□□□□□ -1.28
TDP1-203ENST00000393454 SSX9Q7RTT3 188 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 SLC51BQ86UW2 128 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 OR8H3Q8N146 312 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 ABHD12Q8N2K0 398 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 DMBX1Q8NFW5 382 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 R3HDM4Q96D70 268 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 ADTRPQ96IZ2 230 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 AQP10Q96PS8 301 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 ZNF251Q9BRH9 671 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 TMEM133Q9H2Q1 129 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 PLEKHA2Q9HB19 425 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 FAM212BQ9NTI7 297 aaPredicted RBP7.07□□□□□ -1.28
TDP1-203ENST00000393454 LRRK2Q5S007 2527 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 COL12A1Q99715 3063 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 LOC105371242A0A075B767 164 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 hCG_1809904A0A1W2PP81 198 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 A0A1W2PPE2 198 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 A0A1W2PR64 198 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 A0A1W2PRV1 198 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 C22orf46C9J442 243 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 CHST1O43916 411 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 IGHV4-39P01824 125 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 LIPFP07098 398 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 HTR2BP41595 481 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 CAV2P51636 162 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 ERVK-16P61578 105 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 ID3Q02535 119 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 CLEC9AQ6UXN8 241 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 OR9G1Q8NH87 305 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 UBQLN2Q9UHD9 624 aa7.07□□□□□ -1.28
TDP1-203ENST00000393454 CHD6Q8TD26 2715 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 MARCH11A6NNE9 402 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 GPR137BO60478 399 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 PITX3O75364 302 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 CRYZL1O95825 349 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 CT45A6P0DMU7 189 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 CT45A5P0DMU8 189 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 CT45A7P0DMV0 189 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 COX7A1P24310 79 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 P2RY1P47900 373 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 REG1BP48304 166 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 PDLIM4P50479 330 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 PRRX1P54821 245 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 DLX1P56177 255 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 ARF6P62330 175 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 UBA52P62987 128 aaKnown RBP7.06□□□□□ -1.28
TDP1-203ENST00000393454 C11orf42Q8N5U0 333 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 ZNF383Q8NA42 475 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 OR4S2Q8NH73 311 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 C8orf46Q8TAG6 207 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 SMIM3Q9BZL3 60 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.06□□□□□ -1.28
TDP1-203ENST00000393454 ARHGAP32A7KAX9 2087 aa7.06□□□□□ -1.28
TDP1-203ENST00000393454 FAM24AA6NFZ4 105 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 H7C2Y5 167 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 RBFOX2O43251 390 aaKnown RBP eCLIP7.05□□□□□ -1.28
TDP1-203ENST00000393454 IL3RAP26951 378 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 RTL8BQ17RB0 113 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 GPR157Q5UAW9 335 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 ALKAL2Q6UX46 152 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 ZNF833PQ6ZTB9 187 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 SLC7A5P1Q8MH63 180 aa7.05□□□□□ -1.28
TDP1-203ENST00000393454 VKORC1L1Q8N0U8 176 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms