RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 KIAA1456Q9P272 454 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 GNG12Q9UBI6 72 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 ROS1P08922 2347 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 RAI1Q7Z5J4 1906 aaPredicted RBP7.5□□□□□ -1.21
TDP1-202ENST00000393452 TRAV1-1A0A0B4J248 108 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 GPR37O15354 613 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 GPR12P47775 334 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 LINC00205P59089 165 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 CCL20P78556 96 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 C17orf58Q2M2W7 97 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 LRRC75BQ2VPJ9 315 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 AARDQ4LEZ3 155 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 SPANXN5Q5MJ07 72 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 NCR3LG1Q68D85 454 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 SNRNP40Q96DI7 357 aaKnown RBP7.5□□□□□ -1.21
TDP1-202ENST00000393452 SLC35B3Q9H1N7 401 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 GAB2Q9UQC2 676 aa7.5□□□□□ -1.21
TDP1-202ENST00000393452 POLEQ07864 2286 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 DPRXA6NFQ7 191 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 MARCH11A6NNE9 402 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 RBFOX2O43251 390 aaKnown RBP eCLIP7.49□□□□□ -1.21
TDP1-202ENST00000393452 THBDP07204 575 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 SELLP14151 372 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 TNFSF4P23510 183 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 ZNF134P52741 427 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 EDDM3BP56851 147 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 TLE4Q04727 773 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 HFEQ30201 348 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 H2BFWTQ7Z2G1 175 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 FAM234AQ9H0X4 552 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 IFI27L2Q9H2X8 130 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 RAB9BQ9NP90 201 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 CALYQ9NYX4 217 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 FBXO7Q9Y3I1 522 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 DMXL2Q8TDJ6 3036 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 FAM90A9PA6NNJ1 464 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 PMS2P5A8MQ11 134 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 CD55P08174 381 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 NFYBP25208 207 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 SERF2P84101 59 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 ADIPOQQ15848 244 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 LTC4SQ16873 150 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 TEX36Q5VZQ5 186 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 ZNF788Q6ZQV5 615 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 SCGB1C1Q8TD33 95 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 GAFA1Q96PS6 74 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 OR4C12Q96R67 309 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 RSG1Q9BU20 258 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 WDR61Q9GZS3 305 aaKnown RBP7.49□□□□□ -1.21
TDP1-202ENST00000393452 LINC00574Q9H8X3 128 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 NDRG3Q9UGV2 375 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 ATMQ13315 3056 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 PIEZO2Q9H5I5 2752 aa7.49□□□□□ -1.21
TDP1-202ENST00000393452 KBTBD11-OT1A0A1B0GTJ5 212 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 RBFOX3A6NFN3 312 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 HPRT1P00492 218 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 BSPH1Q075Z2 132 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 SLC38A11Q08AI6 406 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 SLC25A24Q6NUK1 477 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 DUX4L9Q6RFH8 374 aaPredicted RBP7.48□□□□□ -1.21
TDP1-202ENST00000393452 TCF23Q7RTU1 214 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 LILRB2Q8N423 598 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 RBMXL1Q96E39 390 aaKnown RBP7.48□□□□□ -1.21
TDP1-202ENST00000393452 CIB3Q96Q77 187 aaPredicted RBP7.48□□□□□ -1.21
TDP1-202ENST00000393452 DIRC2Q96SL1 478 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 RARRES2Q99969 163 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 RPRMQ9NS64 109 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 GFOD1Q9NXC2 390 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 CLN8Q9UBY8 286 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 A0A1B0GV50 99 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 C17orf100A8MU93 164 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 ZG16O60844 167 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 CYB5R3P00387 301 aaPredicted RBP7.48□□□□□ -1.21
TDP1-202ENST00000393452 HBE1P02100 147 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 PAX6P26367 422 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 RAB7AP51149 207 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 PRR30Q53SZ7 412 aaPredicted RBP7.48□□□□□ -1.21
TDP1-202ENST00000393452 CENPVQ7Z7K6 275 aaPredicted RBP7.48□□□□□ -1.21
TDP1-202ENST00000393452 WFDC8Q8IUA0 241 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 DTD1Q8TEA8 209 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 SFT2D1Q8WV19 159 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 DDB2Q92466 427 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 R3HDM4Q96D70 268 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 ZNF665Q9H7R5 613 aa7.48□□□□□ -1.21
TDP1-202ENST00000393452 TLN1Q9Y490 2541 aaKnown RBP7.48□□□□□ -1.21
TDP1-202ENST00000393452 TET2Q6N021 2002 aaPredicted RBP7.47□□□□□ -1.21
TDP1-202ENST00000393452 M0R1X1 148 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 SLC31A2O15432 143 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 OR4A8P0C604 315 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 TNFRSF1AP19438 455 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 ATP6V1FQ16864 119 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 RPL39P5Q59GN2 51 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 UTF1Q5T230 341 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 TGIF2LYQ8IUE0 185 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.47□□□□□ -1.21
TDP1-202ENST00000393452 MBD3L1Q8WWY6 194 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 TAF15Q92804 592 aaKnown RBP eCLIP7.47□□□□□ -1.21
TDP1-202ENST00000393452 CORO2AQ92828 525 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 PLPPR2Q96GM1 343 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 MSRB2Q9Y3D2 182 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms