RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 FAM96BQ9Y3D0 163 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 K7EPK0 472 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 SOD3P08294 240 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 ADH4P08319 380 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 LOXL3P58215 753 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 CYCSP99999 105 aaKnown RBP12.37□□□□□ -0.43
MKS1-202ENST00000393119 RPL39P5Q59GN2 51 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 TEX36Q5VZQ5 186 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 ZNF561Q8N587 486 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 FAM71E2Q8N5Q1 922 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 NINJ1Q92982 152 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 AGMATQ9BSE5 352 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 SMIM3Q9BZL3 60 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 ZNF665Q9H7R5 613 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 C19orf12Q9NSK7 152 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 CALYQ9NYX4 217 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 GNG12Q9UBI6 72 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 MIOXQ9UGB7 285 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 CRYBG3Q68DQ2 2970 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 USF3Q68DE3 2245 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 PPIAL4EA0A075B759 164 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 LINC00473A8K010 186 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 PPIAL4DF5H284 164 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 RNF224P0DH78 156 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 PPIAL4FP0DN26 164 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 CCL3L1P16619 93 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 ZNF816Q0VGE8 651 aaPredicted RBP12.37□□□□□ -0.43
MKS1-202ENST00000393119 Q3ZCU0 254 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 PPIAL4AQ9Y536 164 aa12.37□□□□□ -0.43
MKS1-202ENST00000393119 C17orf98A8MV24 154 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 C9JQL5 133 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 H0Y980 276 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 SPINT2O43291 252 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 S100A9P06702 114 aaKnown RBP12.36□□□□□ -0.43
MKS1-202ENST00000393119 FBP1P09467 338 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 SFTA3P0C7M3 94 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 MORN2Q502X0 79 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 FAM185AQ8N0U4 392 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 GPR146Q96CH1 333 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 CACFD1Q9UGQ2 172 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 IGHV1-69-2A0A0G2JMI3 117 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 LRRC30A6NM36 301 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 VSTM5A8MXK1 200 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 C1orf196B1AJZ1 125 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 B9A039 149 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 RNASEK-C17orf49H0YIS7 233 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 DEDDO75618 318 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 IGKV1-5P01602 117 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 CGB3P0DN86 165 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 CGB7P0DN87 165 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 HKR1P10072 659 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 F2RL1P55085 397 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 PRAMEF5Q5TYX0 476 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 BTNL8Q6UX41 500 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 AQP10Q96PS8 301 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 MS4A5Q9H3V2 200 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 TUBA4BQ9H853 241 aa12.36□□□□□ -0.43
MKS1-202ENST00000393119 SERPINE2P07093 398 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 OR8U8P0C7N1 319 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 GNG10P50151 68 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 EFNB3Q15768 340 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 NMSQ5H8A3 153 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 ZNF645Q8N7E2 425 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 OR4D5Q8NGN0 318 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 LYPD6BQ8NI32 183 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 ERGIC1Q969X5 290 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 C14orf79Q96F83 325 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 CLCC1Q96S66 551 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
MKS1-202ENST00000393119 HCFC1P51610 2035 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 YLPM1P49750 1951 aaKnown RBP12.35□□□□□ -0.43
MKS1-202ENST00000393119 ZNF705EA8MWA4 302 aaPredicted RBP12.35□□□□□ -0.43
MKS1-202ENST00000393119 FBXO24O75426 580 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 GZMHP20718 246 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 PPT1P50897 306 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 OR5D13Q8NGL4 314 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 PPP1R35Q8TAP8 253 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 H1FXQ92522 213 aaKnown RBP12.35□□□□□ -0.43
MKS1-202ENST00000393119 DIRC2Q96SL1 478 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 TMEM204Q9BSN7 226 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 SLC25A10Q9UBX3 287 aaPredicted RBP12.35□□□□□ -0.43
MKS1-202ENST00000393119 POMT1Q9Y6A1 747 aa12.35□□□□□ -0.43
MKS1-202ENST00000393119 USP9XQ93008 2570 aaPredicted RBP12.35□□□□□ -0.43
MKS1-202ENST00000393119 TMEM8BA6NDV4 472 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 PPIHO43447 177 aaKnown RBP12.34□□□□□ -0.43
MKS1-202ENST00000393119 NDUFS7O75251 213 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 TMEM50AO95807 157 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 MT-ND4LP03901 98 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 FOSL1P15407 271 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 LPAR6P43657 344 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 EIF4EBP1Q13541 118 aaPredicted RBP12.34□□□□□ -0.43
MKS1-202ENST00000393119 SSX8Q7RTT4 187 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 TMED3Q9Y3Q3 217 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 PAX5Q02548 391 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 SMCO1Q147U7 214 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 C4orf17Q53FE4 359 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 CT45A1Q5HYN5 189 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 NCR3LG1Q68D85 454 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 ETV3LQ6ZN32 361 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 CT45A3Q8NHU0 189 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms