RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 IGLC1P0CG04 106 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 SLC35E2P0CK97 266 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 IGLL1P15814 213 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 OR8B12Q8NGG6 310 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 ZNF764Q96H86 408 aaPredicted RBP6.56□□□□□ -1.36
VTI1A-201ENST00000393077 ADTRPQ96IZ2 230 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 LINC00470Q9BZP3 86 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 C19orf67A6NJJ6 358 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 ZNF217O75362 1048 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 GPR75O95800 540 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 GRB2P62993 217 aaKnown RBP6.56□□□□□ -1.36
VTI1A-201ENST00000393077 SRSF7Q16629 238 aaKnown RBP eCLIP6.56□□□□□ -1.36
VTI1A-201ENST00000393077 ADAMTSL5Q6ZMM2 481 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 NUDT22Q9BRQ3 303 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 TEX48A0A1B0GUV7 120 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 A1L4Q6 167 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 C2CD4DB7Z1M9 353 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 C5orf67F2Z3F1 127 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 DRD3P35462 400 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 G6PCP35575 357 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 MFAP2P55001 183 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 EDDM3BP56851 147 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 TAS2R45P59539 299 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 KISS1Q15726 138 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 CCDC144NLQ6NUI1 221 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 TBC1D26Q86UD7 250 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 TUSC5Q8IXB3 177 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 PRR22Q8IZ63 422 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 OR4A5Q8NH83 315 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 MBD3L1Q8WWY6 194 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 LINC00615Q96LM1 132 aaPredicted RBP6.56□□□□□ -1.36
VTI1A-201ENST00000393077 SCRT1Q9BWW7 348 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 CACNG5Q9UF02 275 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 ZSWIM8A7E2V4 1837 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 TRAV9-1A0A075B6T8 112 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 ANKRD30BLA7E2S9 258 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 K7EP34 96 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 HS3ST1O14792 307 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 LMX1BO60663 402 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 TIAF1O95411 115 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 RPS16P62249 146 aaKnown RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 OR10J3Q5JRS4 329 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 DOK3Q7L591 496 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 C20orf196Q8IYI0 205 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 ZNF519Q8TB69 540 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 ABHD14BQ96IU4 210 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 AGMATQ9BSE5 352 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 HDHD3Q9BSH5 251 aaPredicted RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 FOXQ1Q9C009 403 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 FAM206AQ9NX38 181 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 HBZP02008 142 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 RTL8BQ17RB0 113 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 ZFAND6Q6FIF0 208 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 SHISA2Q6UWI4 295 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 BATF2Q8N1L9 274 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 OR10D3Q8NH80 312 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 TAF15Q92804 592 aaKnown RBP eCLIP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 DAZAP1Q96EP5 407 aaKnown RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 ENY2Q9NPA8 101 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 CRIM1Q9NZV1 1036 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 MRPL27Q9P0M9 148 aaKnown RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 SCN3AQ9NY46 2000 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 TRBV7-9A0A0J9YWB2 115 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 hDV102S1A0JD36 115 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 PGPEP1LA6NFU8 196 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 CEACAM5P06731 702 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 CSN3P07498 182 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 CELA3AP09093 270 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 CD38P28907 300 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 NMUP48645 174 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 POU3F1Q03052 451 aaPredicted RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 MEF2CQ06413 473 aaPredicted RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 Q0VG73 95 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 MGAT2Q10469 447 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 EIF3IQ13347 325 aaKnown RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 CDKN3Q16667 212 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 TIMM23BQ5SRD1 257 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 SAMD5Q5TGI4 173 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 FAM169BQ8N8A8 192 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM45BQ96B21 275 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 CHRNA10Q9GZZ6 450 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 S1PR5Q9H228 398 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 UBE2ZQ9H832 354 aaPredicted RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 PRTFDC1Q9NRG1 225 aa6.55□□□□□ -1.36
VTI1A-201ENST00000393077 RIF1Q5UIP0 2472 aaKnown RBP6.55□□□□□ -1.36
VTI1A-201ENST00000393077 EPOPA6NHQ4 379 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 AMY1AP04745 511 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 KIR2DS3Q14952 304 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 SCCPDHQ8NBX0 429 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 PLPPR1Q8TBJ4 325 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM171Q8WVE6 324 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 ZC2HC1AQ96GY0 325 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 MBNL3Q9NUK0 354 aaKnown RBP6.54□□□□□ -1.36
VTI1A-201ENST00000393077 C19orf25Q9UFG5 118 aaPredicted RBP6.54□□□□□ -1.36
VTI1A-201ENST00000393077 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.54□□□□□ -1.36
VTI1A-201ENST00000393077 SNRNP200O75643 2136 aaKnown RBP6.54□□□□□ -1.36
VTI1A-201ENST00000393077 ANKRD36A6QL64 1941 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 TRAV36DV7A0A075B6V5 113 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 C9orf118A6NHY6 69 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms