RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 KRASP01116 189 aa16.6■□□□□ 0.25
PTPN11-202ENST00000392597 OR2B11Q5JQS5 317 aa16.6■□□□□ 0.25
PTPN11-202ENST00000392597 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.6■□□□□ 0.25
PTPN11-202ENST00000392597 HSPB7Q9UBY9 170 aa16.6■□□□□ 0.25
PTPN11-202ENST00000392597 ZNF462Q96JM2 2506 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 FAM90A27PA6NNH2 459 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 B9A039 149 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 G6PCP35575 357 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 TNFRSF9Q07011 255 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 MIDNQ504T8 468 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 TCF23Q7RTU1 214 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 ZCCHC24Q8N2G6 241 aaKnown RBP16.59■□□□□ 0.25
PTPN11-202ENST00000392597 HSD17B11Q8NBQ5 300 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 ATP5SQ99766 215 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 HRH4Q9H3N8 390 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 DYNLRB1Q9NP97 96 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 KCNJ16Q9NPI9 418 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 TRIM77I1YAP6 450 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 PROP1O75360 226 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 Q6ZRG5 221 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 GNPNAT1Q96EK6 184 aaPredicted RBP16.59■□□□□ 0.25
PTPN11-202ENST00000392597 TSNAXQ99598 290 aaKnown RBP16.59■□□□□ 0.25
PTPN11-202ENST00000392597 ABHD14AQ9BUJ0 271 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 TMEM106BQ9NUM4 274 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 PSENENQ9NZ42 101 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 LINC00312Q9Y6C7 94 aa16.59■□□□□ 0.25
PTPN11-202ENST00000392597 PPIAL4EA0A075B759 164 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 hADV38S2A0JD32 116 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 PPIAL4DF5H284 164 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 TMPRSS2O15393 492 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 PPIAL4FP0DN26 164 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 KIR2DS2P43631 304 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 ZNF134P52741 427 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 UBE2KP61086 200 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 MEF2CQ06413 473 aaPredicted RBP16.58■□□□□ 0.24
PTPN11-202ENST00000392597 NCR3LG1Q68D85 454 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 H2BFWTQ7Z2G1 175 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 SH3BGRL3Q9H299 93 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 IDI2-AS1Q9NZ38 188 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 CACFD1Q9UGQ2 172 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 PPIAL4AQ9Y536 164 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 ADGRG4Q8IZF6 3080 aa16.58■□□□□ 0.24
PTPN11-202ENST00000392597 ANKHD1Q8IWZ3 2542 aaKnown RBP16.57■□□□□ 0.24
PTPN11-202ENST00000392597 DIDO1Q9BTC0 2240 aaKnown RBP16.57■□□□□ 0.24
PTPN11-202ENST00000392597 FAM90A9PA6NNJ1 464 aa16.57■□□□□ 0.24
PTPN11-202ENST00000392597 UMAD1C9J7I0 102 aa16.57■□□□□ 0.24
PTPN11-202ENST00000392597 M6PRP20645 277 aa16.57■□□□□ 0.24
PTPN11-202ENST00000392597 ARHGDIBP52566 201 aa16.57■□□□□ 0.24
PTPN11-202ENST00000392597 COMMD1Q8N668 190 aa16.57■□□□□ 0.24
PTPN11-202ENST00000392597 TMEM217Q8N7C4 229 aa16.57■□□□□ 0.24
PTPN11-202ENST00000392597 OR10A7Q8NGE5 316 aa16.57■□□□□ 0.24
PTPN11-202ENST00000392597 PRELID3BQ9Y3B1 194 aa16.57■□□□□ 0.24
PTPN11-202ENST00000392597 TMEM218A2RU14 115 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 M0R1X1 148 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 HPRT1P00492 218 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 IAPPP10997 89 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 ATP6V0CP27449 155 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 ADORA2A-AS1P86434 159 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 NEUROG1Q92886 237 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 NARS2Q96I59 477 aaKnown RBP16.56■□□□□ 0.24
PTPN11-202ENST00000392597 SLC25A10Q9UBX3 287 aaPredicted RBP16.56■□□□□ 0.24
PTPN11-202ENST00000392597 RALYQ9UKM9 306 aaKnown RBP16.56■□□□□ 0.24
PTPN11-202ENST00000392597 PKDREJQ9NTG1 2253 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 MARCH11A6NNE9 402 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 H3BP45 60 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 HBG1P69891 147 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 HBG2P69892 147 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 CT45A1Q5HYN5 189 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 ZNF439Q8NDP4 499 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 CT45A3Q8NHU0 189 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 LINC01560Q8TB33 94 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 HIVEP3Q5T1R4 2406 aa16.56■□□□□ 0.24
PTPN11-202ENST00000392597 TNFRSF13BO14836 293 aaPredicted RBP16.55■□□□□ 0.24
PTPN11-202ENST00000392597 CAMLGP49069 296 aa16.55■□□□□ 0.24
PTPN11-202ENST00000392597 CCL17Q92583 94 aa16.55■□□□□ 0.24
PTPN11-202ENST00000392597 RBKSQ9H477 322 aa16.55■□□□□ 0.24
PTPN11-202ENST00000392597 RPUSD1Q9UJJ7 312 aaKnown RBP16.55■□□□□ 0.24
PTPN11-202ENST00000392597 ARFGEF3Q5TH69 2177 aa16.55■□□□□ 0.24
PTPN11-202ENST00000392597 SCO1O75880 301 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 NDUFB7P17568 137 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 TMEM267Q0VDI3 215 aaPredicted RBP16.54■□□□□ 0.24
PTPN11-202ENST00000392597 AARDQ4LEZ3 155 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 R3HDM4Q96D70 268 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 GAL3ST2Q9H3Q3 398 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 CISD1Q9NZ45 108 aaKnown RBP16.54■□□□□ 0.24
PTPN11-202ENST00000392597 SLC31A2O15432 143 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 FCGR3BO75015 233 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 IFNA5P01569 189 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 GNLYP22749 145 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 LINC00205P59089 165 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 RPL39P5Q59GN2 51 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 OR2G3Q8NGZ4 309 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 DDB2Q92466 427 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 ADTRPQ96IZ2 230 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 CIB3Q96Q77 187 aaPredicted RBP16.54■□□□□ 0.24
PTPN11-202ENST00000392597 S1PR3Q99500 378 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 C19orf12Q9NSK7 152 aa16.54■□□□□ 0.24
PTPN11-202ENST00000392597 LY86O95711 162 aa16.53■□□□□ 0.24
PTPN11-202ENST00000392597 TSPAN15O95858 294 aa16.53■□□□□ 0.24
PTPN11-202ENST00000392597 APOC3P02656 99 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms