RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 NAT8Q9UHE5 227 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 LSM7Q9UK45 103 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 HHLA2Q9UM44 414 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 POLDIP2Q9Y2S7 368 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 CCL27Q9Y4X3 112 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 V9GYY5 206 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 LCTP09848 1927 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 DNAJC13O75165 2243 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 RP1P56715 2156 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TRPM6Q9BX84 2022 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TRANK1O15050 2925 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 PHLPP2Q6ZVD8 1323 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TRGV1A0A0A0MS02 117 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TRAV8-4A0A0B4J246 113 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TRIM64A6NGJ6 449 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TRIM64BA6NI03 449 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 IFITM5A6NNB3 132 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 ANKRD65E5RJM6 399 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 LINC01619G3V211 115 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 BUB1B-PAK6H3BSN5 160 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 H7C0C1 242 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 APOC4-APOC2K7ER74 178 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 M0R3G1 203 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 SCAMP2O15127 329 aaKnown RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 EIF3HO15372 352 aaKnown RBP eCLIP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 GMDSO60547 372 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 SULT1C4O75897 302 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 FLOT1O75955 427 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 PROSCO94903 275 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 CLDN9O95484 217 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 P01737 135 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 CXCL10P02778 98 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 UGT2B4P06133 528 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 SERPINE2P07093 398 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 MSMBP08118 114 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TACSTD2P09758 323 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 IQCF3P0C7M6 154 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 MPC1LP0DKB6 136 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 MT1GP13640 62 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 COX7CP15954 63 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 CSNK2A2P19784 350 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 NT5EP21589 574 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 EVI2AP22794 236 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 FKBP2P26885 142 aaKnown RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 IFNA8P32881 189 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 ATP5OP48047 213 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 FABP6P51161 128 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 CCNHP51946 323 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 STC1P52823 247 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 AP2S1P53680 142 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TAS2R45P59539 299 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 OR2B8PP59922 312 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 GMFBP60983 142 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 RPL37AP61513 92 aaKnown RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 AP1S1P61966 158 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 DEFA6Q01524 100 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 RPA4Q13156 261 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 GPR176Q14439 515 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 OR4D1Q15615 310 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 BATFQ16520 125 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 IQCJQ1A5X6 159 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 ALKBH6Q3KRA9 238 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 CDNFQ49AH0 187 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 AARDQ4LEZ3 155 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 CEP55Q53EZ4 464 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 RNASE10Q5GAN6 216 aaKnown RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 C1orf194Q5T5A4 169 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC25A24Q6NUK1 477 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 LCN15Q6UWW0 184 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 Q6ZSR3 168 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 DEFB128Q7Z7B8 93 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 HOOK3Q86VS8 718 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 UBE2DNLQ8IWF7 75 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC7A5P1Q8MH63 180 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 CCNYL1Q8N7R7 359 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 C8orf31Q8N9H6 132 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 MFSD9Q8NBP5 474 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 LPCAT1Q8NF37 534 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 OR52K1Q8NGK4 314 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 OR13C8Q8NGS7 320 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 OR10Z1Q8NGY1 313 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 OR5B3Q8NH48 314 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 OR51H1Q8NH63 302 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 PPTC7Q8NI37 304 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 ZNF431Q8TF32 576 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 CASTOR1Q8WTX7 329 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 Q8WTZ3 238 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 C11orf40Q8WZ69 217 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 ISOC1Q96CN7 298 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 SMIM8Q96KF7 97 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 LINC00208Q96KT6 92 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 PPM1MQ96MI6 270 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC38A2Q96QD8 506 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 EBNA1BP2Q99848 306 aaKnown RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM175Q9BSA9 504 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 UGT2B28Q9BY64 529 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 NKX6-2Q9C056 277 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 BPESC1Q9GZL8 116 aa-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 NSRP1Q9H0G5 558 aaKnown RBP-0.79□□□□□ -2.54
TRAJ28-201ENST00000390509 FXYD6Q9H0Q3 95 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms