RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 MIDNQ504T8 468 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 UTF1Q5T230 341 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 C1orf87Q8N0U7 546 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 LINC01560Q8TB33 94 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 LEAP2Q969E1 77 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 DYNLRB1Q9NP97 96 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 CACFD1Q9UGQ2 172 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 KALRNO60229 2985 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 TMEM218A2RU14 115 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 SLC31A2O15432 143 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 RAB5CP51148 216 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 UBE2KP61086 200 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 TNFRSF9Q07011 255 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 RPL39P5Q59GN2 51 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 LYPD6BQ8NI32 183 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 CD300LFQ8TDQ1 290 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 ATP5SQ99766 215 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 NDRG3Q9UGV2 375 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 DOCK11Q5JSL3 2073 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 TMEM178BH3BS89 294 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 M0R1X1 148 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 ITGB1BP1O14713 200 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 C1QL1O75973 258 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 GRNP28799 593 aaKnown RBP15.03■□□□□ -0
ACTN4-202ENST00000390009 FHITP49789 147 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 TAS2R30P59541 319 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 TMEM182Q6ZP80 229 aaPredicted RBP15.03■□□□□ -0
ACTN4-202ENST00000390009 H2BFWTQ7Z2G1 175 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 CCL17Q92583 94 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 ABHD14AQ9BUJ0 271 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 HSPB7Q9UBY9 170 aa15.03■□□□□ -0
ACTN4-202ENST00000390009 PPIAL4EA0A075B759 164 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 ZNF729A6NN14 1252 aaPredicted RBP15.02■□□□□ -0
ACTN4-202ENST00000390009 MARCH11A6NNE9 402 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 PPIAL4DF5H284 164 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 RAB29O14966 203 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 PRH1P02810 166 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 PPIAL4FP0DN26 164 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 APOBEC3AP31941 199 aaPredicted RBP15.02■□□□□ -0
ACTN4-202ENST00000390009 CAMLGP49069 296 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 RAB7AP51149 207 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 ZNF616Q08AN1 781 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 CORO2AQ92828 525 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 RBKSQ9H477 322 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 TMEM231Q9H6L2 316 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.02■□□□□ -0
ACTN4-202ENST00000390009 TMEM106BQ9NUM4 274 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 STRAPQ9Y3F4 350 aaKnown RBP15.02■□□□□ -0
ACTN4-202ENST00000390009 PPIAL4AQ9Y536 164 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 RFNGQ9Y644 331 aa15.02■□□□□ -0
ACTN4-202ENST00000390009 FCGR3BO75015 233 aa15.02□□□□□ -0.01
ACTN4-202ENST00000390009 DFFBO76075 338 aa15.02□□□□□ -0.01
ACTN4-202ENST00000390009 NDUFB7P17568 137 aa15.02□□□□□ -0.01
ACTN4-202ENST00000390009 CT45A1Q5HYN5 189 aa15.02□□□□□ -0.01
ACTN4-202ENST00000390009 OR2G3Q8NGZ4 309 aa15.02□□□□□ -0.01
ACTN4-202ENST00000390009 CT45A3Q8NHU0 189 aa15.02□□□□□ -0.01
ACTN4-202ENST00000390009 TSNAXQ99598 290 aaKnown RBP15.02□□□□□ -0.01
ACTN4-202ENST00000390009 MS4A5Q9H3V2 200 aa15.02□□□□□ -0.01
ACTN4-202ENST00000390009 SLC25A10Q9UBX3 287 aaPredicted RBP15.02□□□□□ -0.01
ACTN4-202ENST00000390009 A0A1W2PPE3 182 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 AGPAT2O15120 278 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 METTL15P1P0C7V9 234 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 NFYBP25208 207 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 ADORA2A-AS1P86434 159 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 ATRAIDQ6UW56 229 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 LINC00574Q9H8X3 128 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 TREM1Q9NP99 234 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 C19orf12Q9NSK7 152 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 IDI2-AS1Q9NZ38 188 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 RELNP78509 3460 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 NBASA2RRP1 2371 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 PLAUP00749 431 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 EFNB3Q15768 340 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 SPANXN5Q5MJ07 72 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 R3HDM4Q96D70 268 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 GNPNAT1Q96EK6 184 aaPredicted RBP15.01□□□□□ -0.01
ACTN4-202ENST00000390009 GAB2Q9UQC2 676 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 FAM96BQ9Y3D0 163 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 CHD8Q9HCK8 2581 aa15.01□□□□□ -0.01
ACTN4-202ENST00000390009 hADV38S2A0JD32 116 aa15□□□□□ -0.01
ACTN4-202ENST00000390009 HPRT1P00492 218 aa15□□□□□ -0.01
ACTN4-202ENST00000390009 ADCYAP1P18509 176 aa15□□□□□ -0.01
ACTN4-202ENST00000390009 ARHGDIBP52566 201 aa15□□□□□ -0.01
ACTN4-202ENST00000390009 RUNX1Q01196 453 aa15□□□□□ -0.01
ACTN4-202ENST00000390009 DEFA5Q01523 94 aa15□□□□□ -0.01
ACTN4-202ENST00000390009 C1orf229Q6ZS94 237 aaPredicted RBP15□□□□□ -0.01
ACTN4-202ENST00000390009 UQCC1Q9NVA1 299 aa15□□□□□ -0.01
ACTN4-202ENST00000390009 LINC00312Q9Y6C7 94 aa15□□□□□ -0.01
ACTN4-202ENST00000390009 B9A039 149 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 TSPAN15O95858 294 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 ARL16Q0P5N6 197 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 CDSNQ15517 529 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 HAPLN4Q86UW8 402 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 ZNF439Q8NDP4 499 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 LRRC46Q96FV0 321 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 CISD1Q9NZ45 108 aaKnown RBP14.99□□□□□ -0.01
ACTN4-202ENST00000390009 PRELID3BQ9Y3B1 194 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 NCOR2Q9Y618 2525 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 SAA2-SAA4A0A096LPE2 208 aa14.99□□□□□ -0.01
ACTN4-202ENST00000390009 MED19A0JLT2 244 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms