RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 EFNA2O43921 213 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 SLC25A5P05141 298 aaKnown RBP12.18□□□□□ -0.46
RTF1-201ENST00000389629 OR5AL1P0C617 328 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 ARL14EPLP0DKL9 152 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 TMEM251Q8N6I4 163 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 GATAD1Q8WUU5 269 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 TMEM171Q8WVE6 324 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 H1FXQ92522 213 aaKnown RBP12.18□□□□□ -0.46
RTF1-201ENST00000389629 SRXN1Q9BYN0 137 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 DIDO1Q9BTC0 2240 aaKnown RBP12.18□□□□□ -0.46
RTF1-201ENST00000389629 FBLL1A6NHQ2 334 aaKnown RBP12.18□□□□□ -0.46
RTF1-201ENST00000389629 VSTM5A8MXK1 200 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 SERF1AO75920 110 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 ZNF137PP52743 207 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 ERHP84090 104 aaKnown RBP12.18□□□□□ -0.46
RTF1-201ENST00000389629 C3AR1Q16581 482 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 SH3BGRL2Q9UJC5 107 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 COL4A4P53420 1690 aaPredicted RBP12.18□□□□□ -0.46
RTF1-201ENST00000389629 IGKV1D-13A0A0B4J2D9 117 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 DLEU1O43261 78 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 IGKV1-13P0DP09 117 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 UCP1P25874 307 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 SMIM21Q3B7S5 101 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 LYG1Q8N1E2 194 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 NHLRC2Q8NBF2 726 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 POM121L2Q96KW2 1035 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 DOCK8Q8NF50 2099 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 HTR1DP28221 377 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 ATP5G3P48201 142 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 LRRC75BQ2VPJ9 315 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 CEACAM21Q3KPI0 293 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 MMD2Q8IY49 270 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 OR52L2PQ8NGH6 319 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 OR2Y1Q8NGV0 311 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 UTRNP46939 3433 aa12.18□□□□□ -0.46
RTF1-201ENST00000389629 CCL1P22362 96 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 IL3RAP26951 378 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 PQLC2Q6ZP29 291 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 SCCPDHQ8NBX0 429 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 PRSS3P2Q8NHM4 247 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 WNT5BQ9H1J7 359 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 CLDN16Q9Y5I7 305 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 A8MWP6 167 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 C1QTNF9P0C862 333 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 LYL1P12980 280 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 SELEP16581 610 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 KCNMB1Q16558 191 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 C5orf24Q7Z6I8 188 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 OR4D5Q8NGN0 318 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 TBL2Q9Y4P3 447 aaKnown RBP12.17□□□□□ -0.46
RTF1-201ENST00000389629 BPIFB3P59826 476 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 LCN2P80188 198 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 ZNF525Q8N782 197 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 FAM216AQ8WUB2 273 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 TMEM54Q969K7 222 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 TMEM167BQ9NRX6 74 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 TMEM106BQ9NUM4 274 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 CD55P08174 381 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 CSRP1P21291 193 aaKnown RBP12.17□□□□□ -0.46
RTF1-201ENST00000389629 SSX8Q7RTT4 187 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 TMEM256Q8N2U0 113 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 FAM19A2Q8N3H0 131 aa12.17□□□□□ -0.46
RTF1-201ENST00000389629 DPRXA6NFQ7 191 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 WIPF3A6NGB9 483 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 J3QR89 54 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 UQCRFS1P47985 274 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 LOXL2Q9Y4K0 774 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 J3QT63 122 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 TFF3Q07654 80 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 MMDQ15546 238 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 IGFBP7Q16270 282 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 RTL8BQ17RB0 113 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 COX19Q49B96 90 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 ST6GALNAC6Q969X2 333 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 ZNF581Q9P0T4 197 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 DOCK11Q5JSL3 2073 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 DEFA4P12838 97 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 TNFSF4P23510 183 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 SUB1P53999 127 aaKnown RBP eCLIP12.16□□□□□ -0.46
RTF1-201ENST00000389629 HGFACQ04756 655 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 VWA1Q6PCB0 445 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 TMEM208Q9BTX3 173 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 UBE2ZQ9H832 354 aaPredicted RBP12.16□□□□□ -0.46
RTF1-201ENST00000389629 AKIRIN1Q9H9L7 192 aaPredicted RBP12.16□□□□□ -0.46
RTF1-201ENST00000389629 HAND1O96004 215 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 CT45A10P0DMU9 189 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 OR1C1Q15619 314 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 FAM122AQ96E09 287 aa12.16□□□□□ -0.46
RTF1-201ENST00000389629 A0A1W2PR77 199 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 TEPPQ6URK8 271 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 ZNF441Q8N8Z8 693 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 BEND2Q8NDZ0 799 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 DLL3Q9NYJ7 618 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 KIAA2026Q5HYC2 2103 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 DNPH1O43598 174 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 VENTXO95231 258 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 OR2T6Q8NHC8 308 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
RTF1-201ENST00000389629 CACNA1EQ15878 2313 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms