RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 NUP214P35658 2090 aaPredicted RBP12.06□□□□□ -0.48
SNPH-201ENST00000381867 COX6B1P14854 86 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 ROM1Q03395 351 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 APCDD1LQ8NCL9 501 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 OR2J1Q9GZK6 312 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 MS4A5Q9H3V2 200 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 DTX4Q9Y2E6 619 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 RPS11P62280 158 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNPH-201ENST00000381867 ADIPOQQ15848 244 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 CXorf66Q5JRM2 361 aaPredicted RBP12.05□□□□□ -0.48
SNPH-201ENST00000381867 INO80CQ6PI98 192 aaPredicted RBP12.05□□□□□ -0.48
SNPH-201ENST00000381867 MTURNQ8N3F0 131 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 TRBV9A0A0B4J1U6 114 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 ISG15P05161 165 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 PQLC2Q6ZP29 291 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 HLA-DRB1P01911 266 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 CSRP1P21291 193 aaKnown RBP12.05□□□□□ -0.48
SNPH-201ENST00000381867 SELENOTP62341 195 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 HIKESHIQ53FT3 197 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 NUDT16L1Q9BRJ7 211 aaKnown RBP12.05□□□□□ -0.48
SNPH-201ENST00000381867 SCNM1Q9BWG6 230 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 LPAR2Q9HBW0 351 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 IGKV1D-16P01601 117 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 CKS2P33552 79 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 MAS1LP35410 378 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 COL10A1Q03692 680 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 FAM27BQ5VT28 67 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 PMCHL2Q9BQD1 86 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 SF3B6Q9Y3B4 125 aaKnown RBP12.05□□□□□ -0.48
SNPH-201ENST00000381867 KCNMB2Q9Y691 235 aa12.05□□□□□ -0.48
SNPH-201ENST00000381867 CEACAM18A8MTB9 384 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A26D6RGX4 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 CEACAM21Q3KPI0 293 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 ZNF488Q96MN9 340 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 TMUB1Q9BVT8 246 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 HEXA-AS1Q9H8Q6 139 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 ZNF324O75467 553 aaPredicted RBP12.04□□□□□ -0.48
SNPH-201ENST00000381867 OR2A4O95047 310 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 SCGB1A1P11684 91 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 SRIP30626 198 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 OR2A7Q96R45 310 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 ATG2BQ96BY7 2078 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 A0A1W2PP11 408 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A10PA6NDY2 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A18PA6NE21 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A16PA6NEW6 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A20PA6NIJ5 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A8PA6NJQ4 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A7PA6NKC0 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A22PA8MWA6 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A12PA8MX19 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A5PA8MXJ8 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A23PA8MXZ1 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 AHRRA9YTQ3 701 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A15PP0C7V4 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A13PP0C7W8 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A14PP0C7W9 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 FAM90A24PP0C7X0 464 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 TMEM183AQ8IXX5 376 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 SELENOHQ8IZQ5 122 aaKnown RBP12.04□□□□□ -0.48
SNPH-201ENST00000381867 ZNF645Q8N7E2 425 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 GUCD1Q96NT3 240 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 HIST1H4GQ99525 98 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 QTRT1Q9BXR0 403 aaKnown RBP12.04□□□□□ -0.48
SNPH-201ENST00000381867 UPK3AO75631 287 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 LINC00869P0C866 280 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 IZUMO4Q1ZYL8 232 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 C1orf185Q5T7R7 199 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 HSPB7Q9UBY9 170 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 HS3ST3B1Q9Y662 390 aa12.04□□□□□ -0.48
SNPH-201ENST00000381867 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 ZNF385AQ96PM9 386 aaKnown RBP12.03□□□□□ -0.48
SNPH-201ENST00000381867 MIEN1Q9BRT3 115 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 TMEM70Q9BUB7 260 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 APELAP0DMC3 54 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 Q5BKY6 102 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 CTHRC1Q96CG8 243 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 PARLQ9H300 379 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 ASCC3Q8N3C0 2202 aaKnown RBP12.03□□□□□ -0.48
SNPH-201ENST00000381867 SCN5AQ14524 2016 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 IGHV3OR15-7A0A075B7D8 119 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 PGLYRP1O75594 196 aaPredicted RBP12.03□□□□□ -0.48
SNPH-201ENST00000381867 SCTP09683 121 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 TMEM136Q6ZRR5 245 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 IGHV3-21A0A0B4J1V1 117 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 H7C2G1 150 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 CLDN14O95500 239 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 COX6A1P12074 109 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 PRF1P14222 555 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 HOXB1P14653 301 aaPredicted RBP12.03□□□□□ -0.48
SNPH-201ENST00000381867 ZNF362Q5T0B9 420 aaPredicted RBP12.03□□□□□ -0.48
SNPH-201ENST00000381867 MARS2Q96GW9 593 aaKnown RBP12.03□□□□□ -0.48
SNPH-201ENST00000381867 C5orf66Q9H5L9 145 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 TTC32Q5I0X7 151 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 FBXW9Q5XUX1 488 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 OR52M1Q8NGK5 317 aa12.03□□□□□ -0.48
SNPH-201ENST00000381867 ZFC3H1O60293 1989 aaKnown RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms