RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 DUX5Q96PT3 197 aa15.08■□□□□ 0
SMN2-202ENST00000380742 DPAGT1Q9H3H5 408 aa15.08■□□□□ 0
SMN2-202ENST00000380742 TNFRSF19Q9NS68 423 aa15.08■□□□□ 0
SMN2-202ENST00000380742 GPR132Q9UNW8 380 aa15.08■□□□□ 0
SMN2-202ENST00000380742 DNAJC9-AS1A6NH13 148 aa15.07■□□□□ 0
SMN2-202ENST00000380742 H0YJW9 148 aa15.07■□□□□ 0
SMN2-202ENST00000380742 PGLYRP1O75594 196 aaPredicted RBP15.07■□□□□ 0
SMN2-202ENST00000380742 VENTXO95231 258 aa15.07■□□□□ 0
SMN2-202ENST00000380742 ECI1P42126 302 aa15.07■□□□□ 0
SMN2-202ENST00000380742 HILS1P60008 231 aa15.07■□□□□ 0
SMN2-202ENST00000380742 ASAH1Q13510 395 aa15.07■□□□□ 0
SMN2-202ENST00000380742 SLC9A3R2Q15599 337 aa15.07■□□□□ 0
SMN2-202ENST00000380742 LY6EQ16553 131 aa15.07■□□□□ 0
SMN2-202ENST00000380742 CCBE1Q6UXH8 406 aaPredicted RBP15.07■□□□□ 0
SMN2-202ENST00000380742 ZNF66Q6ZN08 573 aa15.07■□□□□ 0
SMN2-202ENST00000380742 HSD17B10Q99714 261 aaKnown RBP15.07■□□□□ 0
SMN2-202ENST00000380742 VSIG4Q9Y279 399 aa15.07■□□□□ 0
SMN2-202ENST00000380742 IGKV1D-33P01593 117 aa15.06■□□□□ 0
SMN2-202ENST00000380742 IGKV1-33P01594 117 aa15.06■□□□□ 0
SMN2-202ENST00000380742 EBI3Q14213 229 aa15.06■□□□□ 0
SMN2-202ENST00000380742 SURF2Q15527 256 aaPredicted RBP15.06■□□□□ 0
SMN2-202ENST00000380742 THNSL2Q86YJ6 484 aa15.06■□□□□ 0
SMN2-202ENST00000380742 CMTM1Q8IZ96 169 aa15.06■□□□□ 0
SMN2-202ENST00000380742 OR5R1Q8NH85 324 aa15.06■□□□□ 0
SMN2-202ENST00000380742 ZFAND1Q8TCF1 268 aa15.06■□□□□ 0
SMN2-202ENST00000380742 ZNF486Q96H40 463 aaPredicted RBP15.06■□□□□ 0
SMN2-202ENST00000380742 ADTRPQ96IZ2 230 aa15.06■□□□□ 0
SMN2-202ENST00000380742 RTBDNQ9BSG5 229 aaPredicted RBP15.06■□□□□ 0
SMN2-202ENST00000380742 C5orf66Q9H5L9 145 aa15.06■□□□□ 0
SMN2-202ENST00000380742 SLC2A9Q9NRM0 540 aa15.06■□□□□ 0
SMN2-202ENST00000380742 TCF19Q9Y242 345 aa15.06■□□□□ 0
SMN2-202ENST00000380742 POMT1Q9Y6A1 747 aa15.06■□□□□ 0
SMN2-202ENST00000380742 A6NDX4 124 aa15.05■□□□□ -0
SMN2-202ENST00000380742 CTSDP07339 412 aaPredicted RBP15.05■□□□□ -0
SMN2-202ENST00000380742 FAM106CPP0CH98 169 aa15.05■□□□□ -0
SMN2-202ENST00000380742 MC5RP33032 325 aa15.05■□□□□ -0
SMN2-202ENST00000380742 BRWD1-AS2P59051 145 aa15.05■□□□□ -0
SMN2-202ENST00000380742 C16orf87Q6PH81 154 aa15.05■□□□□ -0
SMN2-202ENST00000380742 KCTD9Q7L273 389 aa15.05■□□□□ -0
SMN2-202ENST00000380742 TMEM86BQ8N661 226 aa15.05■□□□□ -0
SMN2-202ENST00000380742 TCTEX1D2Q8WW35 142 aa15.05■□□□□ -0
SMN2-202ENST00000380742 EAF1Q96JC9 268 aaPredicted RBP15.05■□□□□ -0
SMN2-202ENST00000380742 SLC35D1Q9NTN3 355 aa15.05■□□□□ -0
SMN2-202ENST00000380742 WASHC3Q9Y3C0 194 aa15.05■□□□□ -0
SMN2-202ENST00000380742 H7C2Y5 167 aa15.04■□□□□ -0
SMN2-202ENST00000380742 TCF21O43680 179 aa15.04■□□□□ -0
SMN2-202ENST00000380742 RLN1P04808 185 aa15.04■□□□□ -0
SMN2-202ENST00000380742 PIGPP57054 158 aa15.04■□□□□ -0
SMN2-202ENST00000380742 RND3P61587 244 aa15.04■□□□□ -0
SMN2-202ENST00000380742 HES1Q14469 280 aa15.04■□□□□ -0
SMN2-202ENST00000380742 HNF4GQ14541 408 aa15.04■□□□□ -0
SMN2-202ENST00000380742 ABCA11PQ4W5N1 156 aa15.04■□□□□ -0
SMN2-202ENST00000380742 OR2B11Q5JQS5 317 aa15.04■□□□□ -0
SMN2-202ENST00000380742 TMEM219Q86XT9 240 aa15.04■□□□□ -0
SMN2-202ENST00000380742 OR51H1Q8NH63 302 aa15.04■□□□□ -0
SMN2-202ENST00000380742 RITA1Q96K30 269 aa15.04■□□□□ -0
SMN2-202ENST00000380742 SLC25A21Q9BQT8 299 aaPredicted RBP15.04■□□□□ -0
SMN2-202ENST00000380742 CHIAQ9BZP6 476 aa15.04■□□□□ -0
SMN2-202ENST00000380742 VPREB3Q9UKI3 123 aa15.04■□□□□ -0
SMN2-202ENST00000380742 NF1P21359 2839 aa15.03■□□□□ -0
SMN2-202ENST00000380742 A0A0A6YYJ9 748 aa15.03■□□□□ -0
SMN2-202ENST00000380742 BTBD17A6NE02 478 aa15.03■□□□□ -0
SMN2-202ENST00000380742 NDUFB6O95139 128 aa15.03■□□□□ -0
SMN2-202ENST00000380742 APOA2P02652 100 aa15.03■□□□□ -0
SMN2-202ENST00000380742 IGKV1-16P04430 117 aa15.03■□□□□ -0
SMN2-202ENST00000380742 SLC6A1P30531 599 aa15.03■□□□□ -0
SMN2-202ENST00000380742 RBMS2Q15434 407 aaKnown RBP15.03■□□□□ -0
SMN2-202ENST00000380742 TBC1D26Q86UD7 250 aa15.03■□□□□ -0
SMN2-202ENST00000380742 PDPNQ86YL7 162 aa15.03■□□□□ -0
SMN2-202ENST00000380742 Q8N6K4 173 aa15.03■□□□□ -0
SMN2-202ENST00000380742 ADAD2Q8NCV1 583 aaKnown RBP15.03■□□□□ -0
SMN2-202ENST00000380742 OR2T10Q8NGZ9 312 aa15.03■□□□□ -0
SMN2-202ENST00000380742 SCGB3A2Q96PL1 93 aa15.03■□□□□ -0
SMN2-202ENST00000380742 C14orf166Q9Y224 244 aaKnown RBP15.03■□□□□ -0
SMN2-202ENST00000380742 CLDN34H7C241 214 aa15.02■□□□□ -0
SMN2-202ENST00000380742 MPPED1O15442 326 aa15.02■□□□□ -0
SMN2-202ENST00000380742 FCGR3BO75015 233 aa15.02■□□□□ -0
SMN2-202ENST00000380742 MOSP00540 346 aa15.02■□□□□ -0
SMN2-202ENST00000380742 TMEM11P17152 192 aa15.02■□□□□ -0
SMN2-202ENST00000380742 TAGLNQ01995 201 aaKnown RBP15.02■□□□□ -0
SMN2-202ENST00000380742 CATR1Q13166 79 aa15.02■□□□□ -0
SMN2-202ENST00000380742 MZT2BQ6NZ67 158 aa15.02■□□□□ -0
SMN2-202ENST00000380742 TMEM230Q96A57 120 aa15.02■□□□□ -0
SMN2-202ENST00000380742 JMJD8Q96S16 334 aa15.02■□□□□ -0
SMN2-202ENST00000380742 COPZ2Q9P299 210 aa15.02■□□□□ -0
SMN2-202ENST00000380742 PRELID3BQ9Y3B1 194 aa15.02■□□□□ -0
SMN2-202ENST00000380742 RNF212BA8MTL3 300 aa15.01□□□□□ -0.01
SMN2-202ENST00000380742 CHST1O43916 411 aa15.01□□□□□ -0.01
SMN2-202ENST00000380742 RRASP10301 218 aa15.01□□□□□ -0.01
SMN2-202ENST00000380742 F2RP25116 425 aa15.01□□□□□ -0.01
SMN2-202ENST00000380742 S100GP29377 79 aa15.01□□□□□ -0.01
SMN2-202ENST00000380742 UBA52P62987 128 aaKnown RBP15.01□□□□□ -0.01
SMN2-202ENST00000380742 SRSF2Q01130 221 aaKnown RBP15.01□□□□□ -0.01
SMN2-202ENST00000380742 SPAG16Q8N0X2 631 aa15.01□□□□□ -0.01
SMN2-202ENST00000380742 POC5Q8NA72 575 aa15.01□□□□□ -0.01
SMN2-202ENST00000380742 PITPNC1Q9UKF7 332 aa15.01□□□□□ -0.01
SMN2-202ENST00000380742 FLVCR2Q9UPI3 526 aa15.01□□□□□ -0.01
SMN2-202ENST00000380742 FAM240BA0A1B0GVZ2 78 aa15□□□□□ -0.01
SMN2-202ENST00000380742 RAMP3O60896 148 aa15□□□□□ -0.01
SMN2-202ENST00000380742 CRYZL1O95825 349 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms