RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ATP6V1FQ16864 119 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 AKR1C8PQ5T2L2 129 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 FAM213BQ8TBF2 198 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 GAFA1Q96PS6 74 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 PSMG3Q9BT73 122 aaPredicted RBP19.17■□□□□ 0.66
VPS16-201ENST00000380443 TMEM231Q9H6L2 316 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 COQ3Q9NZJ6 369 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 CLN8Q9UBY8 286 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 KPTNQ9Y664 436 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 ZFYVE26Q68DK2 2539 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 ZNF729A6NN14 1252 aaPredicted RBP19.16■□□□□ 0.66
VPS16-201ENST00000380443 DEFB108AA8MXU0 73 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 IAPPP10997 89 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 GUK1Q16774 197 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 FAM53AQ6NSI3 398 aaPredicted RBP19.16■□□□□ 0.66
VPS16-201ENST00000380443 SLC25A24Q6NUK1 477 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 BTNL3Q6UXE8 466 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 TMEM14EPQ6UXP3 125 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 RBKSQ9H477 322 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 GFOD1Q9NXC2 390 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 SH3BGRL2Q9UJC5 107 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 PRELID3BQ9Y3B1 194 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 LINC00473A8K010 186 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 DNASE2O00115 360 aaPredicted RBP19.16■□□□□ 0.66
VPS16-201ENST00000380443 AGPAT2O15120 278 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 SIGLEC5O15389 551 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 SFTA3P0C7M3 94 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 RAB2AP61019 212 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 KLRB1Q12918 225 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 C1orf87Q8N0U7 546 aa19.16■□□□□ 0.66
VPS16-201ENST00000380443 PUSL1Q8N0Z8 303 aaKnown RBP19.16■□□□□ 0.66
VPS16-201ENST00000380443 ESRP2Q9H6T0 727 aaKnown RBP19.16■□□□□ 0.66
VPS16-201ENST00000380443 CADP27708 2225 aa19.15■□□□□ 0.66
VPS16-201ENST00000380443 NKX6-3A6NJ46 265 aa19.15■□□□□ 0.66
VPS16-201ENST00000380443 FAM157AC9JC47 383 aa19.15■□□□□ 0.66
VPS16-201ENST00000380443 CYB5R3P00387 301 aaPredicted RBP19.15■□□□□ 0.66
VPS16-201ENST00000380443 TLE4Q04727 773 aa19.15■□□□□ 0.66
VPS16-201ENST00000380443 TMEM267Q0VDI3 215 aaPredicted RBP19.15■□□□□ 0.66
VPS16-201ENST00000380443 C17orf58Q2M2W7 97 aa19.15■□□□□ 0.66
VPS16-201ENST00000380443 ZNF525Q8N782 197 aa19.15■□□□□ 0.66
VPS16-201ENST00000380443 CACNA1DQ01668 2161 aa19.15■□□□□ 0.66
VPS16-201ENST00000380443 TRAV38-1A0A0B4J264 116 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 H3BP45 60 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 HBE1P02100 147 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 GUCA2BQ16661 112 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 AARDQ4LEZ3 155 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 PRR30Q53SZ7 412 aaPredicted RBP19.14■□□□□ 0.65
VPS16-201ENST00000380443 OR10A7Q8NGE5 316 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 ZGRF1Q86YA3 2104 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 PPIHO43447 177 aaKnown RBP19.14■□□□□ 0.65
VPS16-201ENST00000380443 FHITP49789 147 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 SERF2P84101 59 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 LTC4SQ16873 150 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 OR2B11Q5JQS5 317 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 SCRT1Q9BWW7 348 aa19.14■□□□□ 0.65
VPS16-201ENST00000380443 C1QL1O75973 258 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 H2AFB1P0C5Y9 115 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 METTL15P1P0C7V9 234 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 LRRC75BQ2VPJ9 315 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 SPANXN5Q5MJ07 72 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 FAM201AQ5SY85 155 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 R3HDM4Q96D70 268 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 ADTRPQ96IZ2 230 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 WFIKKN1Q96NZ8 548 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 ABHD14AQ9BUJ0 271 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 IFI27L2Q9H2X8 130 aa19.13■□□□□ 0.65
VPS16-201ENST00000380443 MARCH11A6NNE9 402 aa19.12■□□□□ 0.65
VPS16-201ENST00000380443 TSPAN4O14817 238 aa19.12■□□□□ 0.65
VPS16-201ENST00000380443 MEF2CQ06413 473 aaPredicted RBP19.12■□□□□ 0.65
VPS16-201ENST00000380443 NCR3LG1Q68D85 454 aa19.12■□□□□ 0.65
VPS16-201ENST00000380443 LILRB2Q8N423 598 aa19.12■□□□□ 0.65
VPS16-201ENST00000380443 IDI2-AS1Q9NZ38 188 aa19.12■□□□□ 0.65
VPS16-201ENST00000380443 TRAV1-1A0A0B4J248 108 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 hADV38S2A0JD32 116 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 M0R1X1 148 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 KALRNO60229 2985 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 PRB1P04280 392 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 NCMAPQ5T1S8 102 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 THNSL2Q86YJ6 484 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 RBMXL1Q96E39 390 aaKnown RBP19.11■□□□□ 0.65
VPS16-201ENST00000380443 S1PR3Q99500 378 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 CCL13Q99616 98 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 EIF5A2Q9GZV4 153 aaKnown RBP19.11■□□□□ 0.65
VPS16-201ENST00000380443 TIMM9Q9Y5J7 89 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 BSNQ9UPA5 3926 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 PROP1O75360 226 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 GYPAP02724 150 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 TLE1Q04724 770 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 DHRS7BQ6IAN0 325 aaPredicted RBP19.11■□□□□ 0.65
VPS16-201ENST00000380443 OR52E5Q8NH55 327 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 DTD1Q8TEA8 209 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 PINX1Q96BK5 328 aaKnown RBP19.11■□□□□ 0.65
VPS16-201ENST00000380443 KIAA1456Q9P272 454 aa19.11■□□□□ 0.65
VPS16-201ENST00000380443 THBS3P49746 956 aa19.1■□□□□ 0.65
VPS16-201ENST00000380443 ERVK-16P61578 105 aa19.1■□□□□ 0.65
VPS16-201ENST00000380443 SLC38A11Q08AI6 406 aa19.1■□□□□ 0.65
VPS16-201ENST00000380443 FBXL19-AS1Q494R0 122 aa19.1■□□□□ 0.65
VPS16-201ENST00000380443 SP5Q6BEB4 398 aaPredicted RBP19.1■□□□□ 0.65
VPS16-201ENST00000380443 HAPLN4Q86UW8 402 aa19.1■□□□□ 0.65
VPS16-201ENST00000380443 ZNF843Q8N446 348 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms