RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 DEFB108AA8MXU0 73 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 CLDN1O95832 211 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 RPL23P62829 140 aaKnown RBP10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 ZNF726P1Q15940 193 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 TPTE2P1Q5T6R2 138 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 GCNT2Q8N0V5 402 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 MAP1LC3BQ9GZQ8 125 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 SLC25A22Q9H936 323 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 DECR2Q9NUI1 292 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 TMEM106BQ9NUM4 274 aa10.56□□□□□ -0.72
PRPF40B-202ENST00000380281 IGHV3-43A0A0B4J1X8 118 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 HRASP01112 189 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 IGHV3-43DP0DP04 118 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 TDGF1P13385 188 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 COL8A2P25067 703 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 PCBD1P61457 104 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 TMEM183BQ1AE95 376 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 ALKBH6Q3KRA9 238 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 UNQ5815/PRO19632Q6UWF5 114 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 TCF23Q7RTU1 214 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 TGIF2LYQ8IUE0 185 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 GATAD1Q8WUU5 269 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 OR51I2Q9H344 312 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 A8MXE2 369 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 PPP1R32Q7Z5V6 425 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 OR10G4Q8NGN3 311 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 HSPB9Q9BQS6 159 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 PCED1AQ9H1Q7 454 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 MANBALQ9NQG1 85 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 PSENENQ9NZ42 101 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 NAT8Q9UHE5 227 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 TRAPPC1Q9Y5R8 145 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 LOC105371242A0A075B767 164 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 A0A0U1RQK1 487 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 CDIPTO14735 213 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 DEGS1O15121 323 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 CDS2O95674 445 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 F2RP25116 425 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 CLDN23Q96B33 292 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 FAM122AQ96E09 287 aa10.55□□□□□ -0.72
PRPF40B-202ENST00000380281 ZNF320A2RRD8 509 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 FKBP2P26885 142 aaKnown RBP10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 PAX9P55771 341 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 PLP2Q04941 152 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 IL11RAQ14626 422 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 FAM78BQ5VT40 261 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 ZNF826PQ6ZT77 177 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 CMTM2Q8TAZ6 248 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 PLPPR1Q8TBJ4 325 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 TECTBQ96PL2 329 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 TMEM204Q9BSN7 226 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 CELA3BP08861 270 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 KLF3P57682 345 aaPredicted RBP10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 TAS2R30P59541 319 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 ATP6V1FQ16864 119 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 ATP1A1-AS1Q5TC04 95 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 TMEM42Q69YG0 159 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 H1FOOQ8IZA3 346 aaPredicted RBP10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 CT55Q8WUE5 264 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 C10orf35Q96D05 121 aa10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 YLPM1P49750 1951 aaKnown RBP10.54□□□□□ -0.72
PRPF40B-202ENST00000380281 ANKRD30BLA7E2S9 258 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 OR8B8Q15620 311 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 SF3B5Q9BWJ5 86 aaKnown RBP10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 ZNF703Q9H7S9 590 aaPredicted RBP10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 LOC102723996A0A087X1L8 192 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 IL3RAP26951 378 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 TEX43Q6ZNM6 134 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 FAM58AQ8N1B3 248 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 LRTM2Q8N967 370 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 LHX4Q969G2 390 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 FAM103A1Q9BTL3 118 aaKnown RBP10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 CLN8Q9UBY8 286 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 TNCP24821 2201 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 SMG1Q96Q15 3661 aaKnown RBP10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 TRAV24A0A0B4J272 114 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 YPEL1O60688 119 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 ZNF737O75373 536 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 SYNGR4O95473 234 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 S100GP29377 79 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 UBE2G2P60604 165 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 FGF12P61328 243 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 EIF3IQ13347 325 aaKnown RBP10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 NMSQ5H8A3 153 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 ABHD17BQ5VST6 288 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 FOXL2NBQ6ZUU3 175 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 OR10V1Q8NGI7 309 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 APH1AQ96BI3 265 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 YPEL2Q96QA6 119 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 ATP5SQ99766 215 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 C11orf1Q9H5F2 150 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 WDR54Q9H977 334 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 DLL3Q9NYJ7 618 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 PILRBQ9UKJ0 227 aa10.53□□□□□ -0.72
PRPF40B-202ENST00000380281 PCNX2A6NKB5 2137 aa10.52□□□□□ -0.72
PRPF40B-202ENST00000380281 G6PCP35575 357 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms