RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 K7N7A8 449 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 SMIM6P0DI80 62 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 OPRK1P41145 380 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 THBS3P49746 956 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 UBE2G2P60604 165 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 HTD2P86397 168 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 ZCCHC24Q8N2G6 241 aaKnown RBP12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 MYO15AQ9UKN7 3530 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 FREM1Q5H8C1 2179 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 MBPP02686 304 aaPredicted RBP12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 ACP7Q6ZNF0 438 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 CMTM2Q8TAZ6 248 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 FLYWCH2Q96CP2 140 aaKnown RBP12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 OR51I2Q9H344 312 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 PLSCR4Q9NRQ2 329 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 A0A0A6YYD4 124 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 PPP5D1E7EU14 171 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 IGHG3P01860 377 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 RPL29P47914 159 aaKnown RBP12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 RNF151Q2KHN1 245 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 FAM166AQ6J272 317 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 FGFRL1Q8N441 504 aa12.03□□□□□ -0.48
SHROOM1-203ENST00000378679 H7BYZ3 331 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 LY6DQ14210 128 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 ZNF345Q14585 488 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 TMEM41BQ5BJD5 291 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 ZNF429Q86V71 674 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 TMEM252Q8N6L7 170 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 POC1AQ8NBT0 407 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 PRSS33Q8NF86 280 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 TMEM147Q9BVK8 224 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 SEC11CQ9BY50 192 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 AMMECR1Q9Y4X0 333 aaPredicted RBP12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 WSB1Q9Y6I7 421 aa12.02□□□□□ -0.48
SHROOM1-203ENST00000378679 C12orf77C9JDV5 145 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 FGF8P55075 233 aaPredicted RBP12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 UCP3P55916 312 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 MISP3Q96FF7 219 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 SMIM7Q9BQ49 75 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 GNB4Q9HAV0 340 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 IGHV1-18A0A0C4DH31 117 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 MDFIC2A0A1B0GVS7 189 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 MSGN1A6NI15 193 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 GCSAMQ8N6F7 178 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 CLCF1Q9UBD9 225 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 MGST1P10620 155 aaKnown RBP12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 S100A7P31151 101 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 TNXAQ16473 311 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 DRAM1Q8N682 238 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 TVP23CQ96ET8 276 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 NEIL1Q96FI4 390 aaPredicted RBP12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 DCTN5Q9BTE1 182 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 SLC25A22Q9H936 323 aa12.02□□□□□ -0.49
SHROOM1-203ENST00000378679 TIMP3P35625 211 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 SLC35E4Q6ICL7 350 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 FAM122AQ96E09 287 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 SAT2Q96F10 170 aaPredicted RBP12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 TP53RKQ96S44 253 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 IGKV1-27A0A075B6S5 117 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 MAP1LC3B2A6NCE7 125 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 IFNL4K9M1U5 179 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 PGA5P0DJD9 388 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 HGFACQ04756 655 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 COMMD1Q8N668 190 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 TMEM230Q96A57 120 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 ATP5SQ99766 215 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 MAP1LC3BQ9GZQ8 125 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 SH2D2AQ9NP31 389 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 IGHV3-72A0A0B4J1Y9 119 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 B9A039 149 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 RNF224P0DH78 156 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 APOBEC3AP31941 199 aaPredicted RBP12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 HIST1H3AP68431 136 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 ATP6V1FQ16864 119 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 ZNF645Q8N7E2 425 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 GPR146Q96CH1 333 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 COL25A1Q9BXS0 654 aaPredicted RBP12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 SLC35B3Q9H1N7 401 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 PRR14LQ5THK1 2151 aa12.01□□□□□ -0.49
SHROOM1-203ENST00000378679 IGKV1D-8A0A087WSZ0 117 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 IGHV1-69-2A0A0G2JMI3 117 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 A0A1B0GV90 55 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 CXorf65A6NEN9 183 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 PROB1E7EW31 1015 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 LDLRAD4O15165 306 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 COX7A2P2O60397 106 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 HPRT1P00492 218 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 NCR3LG1Q68D85 454 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 KCNIP4Q6PIL6 250 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 ZNF66Q6ZN08 573 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 OR52M1Q8NGK5 317 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 TMEM187Q14656 261 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 FOXL2NBQ6ZUU3 175 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 FAM216BQ8N7L0 139 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 PCGF1Q9BSM1 259 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 NDUFA2O43678 99 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 DEDDO75618 318 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 NTF4P34130 210 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 DHRS11Q6UWP2 260 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms