RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.63□□□□□ -1.19
LIG3-202ENST00000378526 ECM29Q5VYK3 1845 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 OR2A4O95047 310 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 RBMY1FQ15415 496 aaKnown RBP7.63□□□□□ -1.19
LIG3-202ENST00000378526 TBR1Q16650 682 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 OR2A7Q96R45 310 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 KLK15Q9H2R5 256 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 SYNGR1O43759 233 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 EFNB2P52799 333 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 UCP3P55916 312 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 APCDD1LQ8NCL9 501 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 KIR3DX1Q9H7L2 352 aa7.63□□□□□ -1.19
LIG3-202ENST00000378526 SYNGR3O43761 229 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 SSPNQ14714 243 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 THSD4Q6ZMP0 1018 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 FMC1Q96HJ9 113 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 GJD4Q96KN9 370 aaPredicted RBP7.62□□□□□ -1.19
LIG3-202ENST00000378526 SH3BGRL3Q9H299 93 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 LPAR2Q9HBW0 351 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 PRSS21Q9Y6M0 314 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 DEFB119Q8N690 84 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 SLC25A40Q8TBP6 338 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 LRRC37A3O60309 1634 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 CD160O95971 181 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 GZMHP20718 246 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 COL10A1Q03692 680 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 OR4C3Q8NH37 302 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 MRGPRX3Q96LB0 322 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 IZUMO1RA6ND01 250 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 FGF17O60258 216 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 TOMM40O96008 361 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 CENPWQ5EE01 88 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 TMEM25Q86YD3 366 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 ST6GALNAC6Q969X2 333 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 TMEM242Q9NWH2 141 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 H3BNC9 293 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 KIAA1644Q3SXP7 199 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 ADAMTSL5Q6ZMM2 481 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 ZFP64Q9NPA5 681 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 PROCRQ9UNN8 238 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 CCL27Q9Y4X3 112 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 FRG2CA6NGY1 282 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 CD70P32970 193 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 RBM3P98179 157 aaKnown RBP7.62□□□□□ -1.19
LIG3-202ENST00000378526 SFXN3Q9BWM7 321 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 LAMTOR3Q9UHA4 124 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 SIGLEC7Q9Y286 467 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 MPC1Q9Y5U8 109 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 C3P01024 1663 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 A0A1W2PR48 441 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 A6NNC1 897 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 THY1P04216 161 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 PSG1P11464 419 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 PSG6Q00889 435 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 V9GYY9 64 aa7.62□□□□□ -1.19
LIG3-202ENST00000378526 ATAD5Q96QE3 1844 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 H3BMM0 161 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 ZNF688P0C7X2 276 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 UBE2WQ96B02 151 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 COQ2Q96H96 371 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 RNF122Q9H9V4 155 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 DAPP1Q9UN19 280 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 TJP1Q07157 1748 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 KCNE1BA0A087WTH5 132 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 IGKCP01834 107 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 FOXL2P58012 376 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 C18orf15Q96N68 181 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BLQ99880 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 SPXQ9BT56 116 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 ROBO1Q9Y6N7 1651 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 FAM157BP0CG42 384 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 NPPBP16860 134 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 IFITM2Q01629 132 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 CD300EQ496F6 205 aaPredicted RBP7.61□□□□□ -1.19
LIG3-202ENST00000378526 SSBP3Q9BWW4 388 aaPredicted RBP7.61□□□□□ -1.19
LIG3-202ENST00000378526 SIRT4Q9Y6E7 314 aaPredicted RBP7.61□□□□□ -1.19
LIG3-202ENST00000378526 PPDPFLQ8WWR9 84 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BKO60814 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HBDP02042 147 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BJP06899 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BOP23527 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BBP33778 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BDP58876 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BCP62807 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST2H2BEQ16778 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BHQ93079 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BNQ99877 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 HIST1H2BMQ99879 126 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 RHNO1Q9BSD3 238 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 M0R1B8 84 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 SNAI2O43623 268 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 CD5LO43866 347 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 PPBPP02775 128 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 C8orf88P0DMB2 117 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 SRD5A1P18405 259 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 DMKNQ6E0U4 476 aaPredicted RBP7.61□□□□□ -1.19
LIG3-202ENST00000378526 OR51G1Q8NGK1 321 aa7.61□□□□□ -1.19
LIG3-202ENST00000378526 NABP2Q9BQ15 211 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms