RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 C1QL3Q5VWW1 255 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 OR13H1Q8NG92 308 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 FAM174AQ8TBP5 190 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 ZNF418Q8TF45 676 aaPredicted RBP10.16□□□□□ -0.78
NPHP4-202ENST00000378161 PATE1Q8WXA2 126 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
NPHP4-202ENST00000378161 PLXNA1Q9UIW2 1896 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 KNTC1P50748 2209 aa10.16□□□□□ -0.78
NPHP4-202ENST00000378161 ZNF236Q9UL36 1845 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 A0A087X0K7 114 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 PRSS37A4D1T9 235 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 C9orf118A6NHY6 69 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 PLP2Q04941 152 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 DEFB133Q30KQ1 61 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 SIGLEC12Q96PQ1 595 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 NUDT22Q9BRQ3 303 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.15□□□□□ -0.78
NPHP4-202ENST00000378161 GNG3P63215 75 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 H1FNTQ75WM6 255 aaPredicted RBP10.15□□□□□ -0.78
NPHP4-202ENST00000378161 ZBTB34Q8NCN2 500 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 OR4A5Q8NH83 315 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 TIMP4Q99727 224 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 DGAT2L6Q6ZPD8 337 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 SHISA6Q6ZSJ9 500 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 S1PR5Q9H228 398 aa10.15□□□□□ -0.78
NPHP4-202ENST00000378161 DNAJB12Q9NXW2 375 aaKnown RBP10.15□□□□□ -0.78
NPHP4-202ENST00000378161 ZNF646O15015 1829 aaPredicted RBP10.15□□□□□ -0.79
NPHP4-202ENST00000378161 TRAV8-6A0A0B4J262 113 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 APOMO95445 188 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 HBZP02008 142 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 OR5D13Q8NGL4 314 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 PLPPR1Q8TBJ4 325 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 PYGO2Q9BRQ0 406 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 GNB4Q9HAV0 340 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 SIP14410 1827 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 CRYGCP07315 174 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 CD38P28907 300 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 OR52N5Q8NH56 324 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 OTOSQ8NHW6 89 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 TMEM204Q9BSN7 226 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 TXNIPQ9H3M7 391 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 A0A1W2PPV9 198 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 ZFAND5O76080 213 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 FAM53BQ14153 422 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 OR10J3Q5JRS4 329 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 NHLRC2Q8NBF2 726 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 FGF21Q9NSA1 209 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 MMP17Q9ULZ9 603 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 B9D1Q9UPM9 204 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 ASCC3Q8N3C0 2202 aaKnown RBP10.14□□□□□ -0.79
NPHP4-202ENST00000378161 FOXL1Q12952 345 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 C20orf196Q8IYI0 205 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 SPSB4Q96A44 273 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 NRTNQ99748 197 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 R4GMQ9 66 aa10.14□□□□□ -0.79
NPHP4-202ENST00000378161 TRAV1-1A0A0B4J248 108 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 A0A1W2PR80 420 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 H3BRM9 83 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 SOCS1O15524 211 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 SLC35B1P78383 322 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 OR4C3Q8NH37 302 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 TMEM230Q96A57 120 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 SRSF8Q9BRL6 282 aaKnown RBP10.13□□□□□ -0.79
NPHP4-202ENST00000378161 SMPXQ9UHP9 88 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 CHEK1O14757 476 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 CTSBP07858 339 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 IGFBP2P18065 325 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 SLC38A11Q08AI6 406 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 MMD2Q8IY49 270 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 CACNA1DQ01668 2161 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 VSIG8P0DPA2 414 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 ID1P41134 155 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 MALLQ13021 153 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 RTL8BQ17RB0 113 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 NXF5Q9H1B4 397 aaKnown RBP10.13□□□□□ -0.79
NPHP4-202ENST00000378161 SLC7A10Q9NS82 523 aa10.13□□□□□ -0.79
NPHP4-202ENST00000378161 IGSF23A1L1A6 192 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 FCGR2AP12318 317 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 CAMPP49913 170 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 MEF2CQ06413 473 aaPredicted RBP10.12□□□□□ -0.79
NPHP4-202ENST00000378161 TMEM240Q5SV17 173 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 C6orf201Q7Z4U5 140 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 SCCPDHQ8NBX0 429 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 APOBEC3DQ96AK3 386 aaPredicted RBP10.12□□□□□ -0.79
NPHP4-202ENST00000378161 NPFFR1Q9GZQ6 430 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 IL36BQ9NZH7 164 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 BOKQ9UMX3 212 aaPredicted RBP10.12□□□□□ -0.79
NPHP4-202ENST00000378161 C3orf85A0A1B0GTC6 90 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 CRYM-AS1A6NIL9 109 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 CT45A10P0DMU9 189 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 SLC25A6P12236 298 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 DRD3P35462 400 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 SSBP2P81877 361 aaPredicted RBP10.12□□□□□ -0.79
NPHP4-202ENST00000378161 SCN10AQ9Y5Y9 1956 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 PGPEP1LA6NFU8 196 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 TMEM262E9PQX1 116 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 H0YIG0 161 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 SRFP11831 508 aa10.12□□□□□ -0.79
NPHP4-202ENST00000378161 IGLL1P15814 213 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms