RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 NXPH2O95156 264 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 ATP5G3P48201 142 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 MDP1Q86V88 176 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 TDHQ8IZJ6 230 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 TMEM256Q8N2U0 113 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 ZNF114Q8NC26 417 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 OR10P1Q8NGE3 313 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 TMEM147Q9BVK8 224 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 MRPS18CQ9Y3D5 142 aaKnown RBP15.1■□□□□ 0.01
GNE-201ENST00000377902 TEX38Q6PEX7 206 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 TMEM105Q8N8V8 129 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 DTD1Q8TEA8 209 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 LURAP1Q96LR2 239 aa15.1■□□□□ 0.01
GNE-201ENST00000377902 PIGBOS1A0A0B4J2F0 54 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 GGCTO75223 188 aaKnown RBP15.09■□□□□ 0.01
GNE-201ENST00000377902 C1QTNF9P0C862 333 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 CD33P20138 364 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 IL3RAP26951 378 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 PAX5Q02548 391 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 LRP11Q86VZ4 500 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 TPRX1Q8N7U7 411 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 NEIL1Q96FI4 390 aaPredicted RBP15.09■□□□□ 0.01
GNE-201ENST00000377902 ACY3Q96HD9 319 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 NOL4LQ96MY1 436 aaPredicted RBP15.09■□□□□ 0.01
GNE-201ENST00000377902 OR2J1Q9GZK6 312 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 MBNL3Q9NUK0 354 aaKnown RBP15.09■□□□□ 0.01
GNE-201ENST00000377902 PRR14LQ5THK1 2151 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 WNT9BO14905 357 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 GCGP01275 180 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 SERPINA7P05543 415 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 COX5AP20674 150 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 GNB1P62873 340 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 AESQ08117 197 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 SLC10A1Q14973 349 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 CST9LP1Q5W188 147 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 DBX2Q6ZNG2 339 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 TCF23Q7RTU1 214 aa15.09■□□□□ 0.01
GNE-201ENST00000377902 FAM90A26D6RGX4 464 aa15.08■□□□□ 0
GNE-201ENST00000377902 P0C879 139 aa15.08■□□□□ 0
GNE-201ENST00000377902 HNF1AP20823 631 aa15.08■□□□□ 0
GNE-201ENST00000377902 ERVK11-1P61568 191 aa15.08■□□□□ 0
GNE-201ENST00000377902 LINC00696Q6ZRV3 163 aa15.08■□□□□ 0
GNE-201ENST00000377902 ZNF826PQ6ZT77 177 aa15.08■□□□□ 0
GNE-201ENST00000377902 ZNF645Q8N7E2 425 aa15.08■□□□□ 0
GNE-201ENST00000377902 ANAPC16Q96DE5 110 aa15.08■□□□□ 0
GNE-201ENST00000377902 TTTY12Q9BZ98 90 aa15.08■□□□□ 0
GNE-201ENST00000377902 MED13Q9UHV7 2174 aa15.08■□□□□ 0
GNE-201ENST00000377902 IGHV3-43A0A0B4J1X8 118 aa15.08■□□□□ 0
GNE-201ENST00000377902 A0A0U1RQK1 487 aa15.08■□□□□ 0
GNE-201ENST00000377902 ZNF320A2RRD8 509 aa15.08■□□□□ 0
GNE-201ENST00000377902 DEFB108AA8MXU0 73 aa15.08■□□□□ 0
GNE-201ENST00000377902 C12orf77C9JDV5 145 aa15.08■□□□□ 0
GNE-201ENST00000377902 NDUFB4O95168 129 aa15.08■□□□□ 0
GNE-201ENST00000377902 IGHV3-43DP0DP04 118 aa15.08■□□□□ 0
GNE-201ENST00000377902 ZNF124Q15973 351 aa15.08■□□□□ 0
GNE-201ENST00000377902 LINC01551Q86U37 167 aa15.08■□□□□ 0
GNE-201ENST00000377902 TMEM18Q96B42 140 aa15.08■□□□□ 0
GNE-201ENST00000377902 PLPPR2Q96GM1 343 aa15.08■□□□□ 0
GNE-201ENST00000377902 MANBALQ9NQG1 85 aa15.08■□□□□ 0
GNE-201ENST00000377902 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.08■□□□□ 0
GNE-201ENST00000377902 CBLN4Q9NTU7 201 aa15.08■□□□□ 0
GNE-201ENST00000377902 TP53TG5Q9Y2B4 290 aa15.08■□□□□ 0
GNE-201ENST00000377902 TCAPO15273 167 aa15.07■□□□□ 0
GNE-201ENST00000377902 CNN1P51911 297 aaKnown RBP15.07■□□□□ 0
GNE-201ENST00000377902 MOB1BQ7L9L4 216 aa15.07■□□□□ 0
GNE-201ENST00000377902 FAM173AQ9BQD7 235 aa15.07■□□□□ 0
GNE-201ENST00000377902 WIPI2Q9Y4P8 454 aa15.07■□□□□ 0
GNE-201ENST00000377902 SOX15O60248 233 aa15.07■□□□□ 0
GNE-201ENST00000377902 SCGB1D1O95968 90 aa15.07■□□□□ 0
GNE-201ENST00000377902 GCH1P30793 250 aa15.07■□□□□ 0
GNE-201ENST00000377902 EDDM3BP56851 147 aa15.07■□□□□ 0
GNE-201ENST00000377902 TRA2AQ13595 282 aaKnown RBP eCLIP15.07■□□□□ 0
GNE-201ENST00000377902 FIP1L1Q6UN15 594 aaKnown RBP15.07■□□□□ 0
GNE-201ENST00000377902 Q6ZR03 302 aa15.07■□□□□ 0
GNE-201ENST00000377902 Q8N7P7 452 aa15.07■□□□□ 0
GNE-201ENST00000377902 ZNF709Q8N972 641 aa15.07■□□□□ 0
GNE-201ENST00000377902 RTL8AQ9BWD3 113 aa15.07■□□□□ 0
GNE-201ENST00000377902 PATZ1Q9HBE1 687 aaKnown RBP15.07■□□□□ 0
GNE-201ENST00000377902 SSPNQ14714 243 aa15.06■□□□□ 0
GNE-201ENST00000377902 DCAF12Q5T6F0 453 aa15.06■□□□□ 0
GNE-201ENST00000377902 MCEMP1Q8IX19 187 aa15.06■□□□□ 0
GNE-201ENST00000377902 GBGT1Q8N5D6 347 aa15.06■□□□□ 0
GNE-201ENST00000377902 TMEM251Q8N6I4 163 aa15.06■□□□□ 0
GNE-201ENST00000377902 RFESDQ8TAC1 157 aa15.06■□□□□ 0
GNE-201ENST00000377902 SNHG12Q9BXW3 62 aa15.06■□□□□ 0
GNE-201ENST00000377902 GP6Q9HCN6 339 aa15.06■□□□□ 0
GNE-201ENST00000377902 LOXL2Q9Y4K0 774 aa15.06■□□□□ 0
GNE-201ENST00000377902 LINC00473A8K010 186 aa15.06■□□□□ 0
GNE-201ENST00000377902 SH2D1BO14796 132 aa15.06■□□□□ 0
GNE-201ENST00000377902 PDGFBP01127 241 aaPredicted RBP15.06■□□□□ 0
GNE-201ENST00000377902 CDC34P49427 236 aaPredicted RBP15.06■□□□□ 0
GNE-201ENST00000377902 MSMO1Q15800 293 aa15.06■□□□□ 0
GNE-201ENST00000377902 CISD2Q8N5K1 135 aaKnown RBP15.06■□□□□ 0
GNE-201ENST00000377902 MRGPRDQ8TDS7 321 aa15.06■□□□□ 0
GNE-201ENST00000377902 GALMQ96C23 342 aa15.06■□□□□ 0
GNE-201ENST00000377902 SDSLQ96GA7 329 aa15.06■□□□□ 0
GNE-201ENST00000377902 TRAPPC1Q9Y5R8 145 aa15.06■□□□□ 0
GNE-201ENST00000377902 RNF212BA8MTL3 300 aa15.05■□□□□ 0
GNE-201ENST00000377902 RBFOX2O43251 390 aaKnown RBP eCLIP15.05■□□□□ 0
GNE-201ENST00000377902 HAND1O96004 215 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms