RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 A0A1W2PRV1 198 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 LRRC30A6NM36 301 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 H3BP45 60 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 TM4SF5O14894 197 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 FCN3O75636 299 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 SSTR5P35346 364 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 RND2P52198 227 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 LINC00205P59089 165 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 ERVFRD-1P60508 538 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 AESQ08117 197 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 KHDC3LQ587J8 217 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 ACSM6Q6P461 480 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 C22orf34Q6ZV56 151 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 RBMXL1Q96E39 390 aaKnown RBP7.97□□□□□ -1.13
TRIM39-202ENST00000376659 ATG101Q9BSB4 218 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 LINC00574Q9H8X3 128 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 SSUH2Q9Y2M2 353 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 KIAA2026Q5HYC2 2103 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 A0A087X0M5 115 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 A0A1B0GX30 115 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 NXPH2O95156 264 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 IL6RP08887 468 aaPredicted RBP7.97□□□□□ -1.13
TRIM39-202ENST00000376659 Q8WTZ3 238 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 C20orf24Q9BUV8 137 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 PBDC1Q9BVG4 233 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 VPS13CQ709C8 3753 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 CUL9Q8IWT3 2517 aa7.97□□□□□ -1.13
TRIM39-202ENST00000376659 IGLV3-9A0A075B6K5 115 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 F2RL2O00254 374 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 ZZEF1O43149 2961 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 DFFBO76075 338 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 OR13C7P0DN81 318 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 NQO2P16083 231 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 GLIPR1P48060 266 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 COL10A1Q03692 680 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 SLC35E3Q7Z769 313 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 RPP25LQ8N5L8 163 aaKnown RBP7.96□□□□□ -1.13
TRIM39-202ENST00000376659 IL1F10Q8WWZ1 152 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 EIF5A2Q9GZV4 153 aaKnown RBP7.96□□□□□ -1.13
TRIM39-202ENST00000376659 OR2D2Q9H210 308 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 OBP2BQ9NPH6 170 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 TRAPPC2LQ9UL33 140 aa7.96□□□□□ -1.13
TRIM39-202ENST00000376659 PIGBOS1A0A0B4J2F0 54 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 WDR1O75083 606 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 IAPPP10997 89 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF134P52741 427 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 CD81P60033 236 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 TMEM41BQ5BJD5 291 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 WDR25Q64LD2 544 aaPredicted RBP7.96□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF474Q6S9Z5 364 aaPredicted RBP7.96□□□□□ -1.14
TRIM39-202ENST00000376659 LRP11Q86VZ4 500 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 RPRMLQ8N4K4 120 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 PRO1933Q9H354 126 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 RPS10P5Q9NQ39 176 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 PSENENQ9NZ42 101 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 INTS1Q8N201 2190 aaKnown RBP7.96□□□□□ -1.14
TRIM39-202ENST00000376659 FAM90A9PA6NNJ1 464 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 C15orf62A8K5M9 175 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 CLDN14O95500 239 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 METTL15P1P0C7V9 234 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF610Q8N9Z0 462 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF439Q8NDP4 499 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 IFI27L2Q9H2X8 130 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 NCOR1P1Q9H4R4 102 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 CDH20Q9HBT6 801 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 KNTC1P50748 2209 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 ADGRG4Q8IZF6 3080 aa7.96□□□□□ -1.14
TRIM39-202ENST00000376659 SPAARA0A1B0GVQ0 90 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 OR5H1A6NKK0 313 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 RAB29O14966 203 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 CD55P08174 381 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 BCL2P10415 239 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF25P17030 456 aaPredicted RBP7.95□□□□□ -1.14
TRIM39-202ENST00000376659 SERF2P84101 59 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 GCSAMQ8N6F7 178 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 TCTEX1D1Q8N7M0 179 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 NEK7Q8TDX7 302 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 TAF15Q92804 592 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM39-202ENST00000376659 TMEM242Q9NWH2 141 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 GRPP07492 148 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 SNRNP70P08621 437 aaKnown RBP7.95□□□□□ -1.14
TRIM39-202ENST00000376659 CCKARP32238 428 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 G6PCP35575 357 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 GATA4P43694 442 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 C17orf58Q2M2W7 97 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 DEFB124Q8NES8 71 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 ZDHHC16Q969W1 377 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 TMPRSS5Q9H3S3 457 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 GAB2Q9UQC2 676 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 RELNP78509 3460 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 IGHV3-64DA0A0J9YX35 117 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 AHRRA9YTQ3 701 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 SOX15O60248 233 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 IGHV3-13P01766 116 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 SERPINE2P07093 398 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF16P17020 682 aaPredicted RBP7.95□□□□□ -1.14
TRIM39-202ENST00000376659 DUTP33316 252 aaKnown RBP7.95□□□□□ -1.14
TRIM39-202ENST00000376659 RPL23AP62750 156 aaKnown RBP7.95□□□□□ -1.14
TRIM39-202ENST00000376659 VAMP2P63027 116 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 P4HA3Q7Z4N8 544 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms