RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TMEM18Q96B42 140 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ADAMTS9Q9P2N4 1935 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 LOC400499M0QZD8 3231 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 H0Y8G0 127 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 WNT5AP41221 380 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 KRTDAPP60985 99 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 P2RY6Q15077 328 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 NMSQ5H8A3 153 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 MIC13Q5XKP0 118 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 SLC35E3Q7Z769 313 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ZNF525Q8N782 197 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 LINC00469Q8N7U9 141 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 SGMS2Q8NHU3 365 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 R3HDM4Q96D70 268 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 FER1L6-AS2Q96M78 137 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ODAMA1E959 279 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 B3GALT5-AS1P59052 145 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 HIST1H3AP68431 136 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TNFRSF9Q07011 255 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 DEFB123Q8N688 67 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TMEM147Q9BVK8 224 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 CHD3Q12873 2000 aaKnown RBP12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 LOC102723996A0A087X1L8 192 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 A0A1B0GUS0 222 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 IGKV1-5P01602 117 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 Q6ZPA2 131 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 S1PR3Q99500 378 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 SPG11Q96JI7 2443 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 FOXI3A8MTJ6 420 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ERVFC1-1P60608 527 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 RAB31Q13636 194 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 KIAA1644Q3SXP7 199 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 WDYHV1Q96HA8 205 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ACY3Q96HD9 319 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 IMMP2LQ96T52 175 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 WDR61Q9GZS3 305 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 C12orf77C9JDV5 145 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 DNPH1O43598 174 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ATP5G3P48201 142 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TRA2AQ13595 282 aaKnown RBP eCLIP12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TCF23Q7RTU1 214 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 RPP25LQ8N5L8 163 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 H1FXQ92522 213 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 RND1Q92730 232 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 POM121L2Q96KW2 1035 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 MS4A10Q96PG2 267 aa12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ZNF703Q9H7S9 590 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1B-201ENST00000376259 IFNL4K9M1U5 179 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PMCHP20382 165 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 DDTP30046 118 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PNRC1Q12796 327 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 LRTM2Q8N967 370 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 OR4X1Q8NH49 305 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 SIRT7Q9NRC8 400 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PSPNO60542 156 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 SSX7Q7RTT5 188 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TMEM178AQ8NBL3 297 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ZNRF1Q8ND25 227 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 SSC4DQ8WTU2 575 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 UHRF2Q96PU4 802 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 FGF23Q9GZV9 251 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 CBLN4Q9NTU7 201 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PAM16Q9Y3D7 125 aa12.15□□□□□ -0.46
TNFRSF1B-201ENST00000376259 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.47
TNFRSF1B-201ENST00000376259 NEURL1O76050 574 aa12.15□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SP1P08047 785 aa12.15□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SELENOVP59797 346 aa12.15□□□□□ -0.47
TNFRSF1B-201ENST00000376259 RPL30P62888 115 aaKnown RBP12.15□□□□□ -0.47
TNFRSF1B-201ENST00000376259 RNPS1Q15287 305 aaKnown RBP12.15□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SGK494Q96LW2 274 aa12.15□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PIGBOS1A0A0B4J2F0 54 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 YKT6O15498 198 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ENSAO43768 121 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 NAPSAO96009 420 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 MPV17P39210 176 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PAX9P55771 341 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PPP1R35Q8TAP8 253 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 DERL1Q9BUN8 251 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SEMA5BQ9P283 1151 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 CTXND1A0A1B0GTU2 59 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 NKX2-8O15522 239 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 OR10J4P0C629 311 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 REG1BP48304 166 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 LHX2P50458 406 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ZNF718Q3SXZ3 478 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 RPL39P5Q59GN2 51 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ABHD5Q8WTS1 349 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 BTF3L4Q96K17 158 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PITPNC1Q9UKF7 332 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PLXNB1O43157 2135 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 A8MXE2 369 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 UCP2P55851 309 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PSG7Q13046 419 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 DEFB109BQ30KR1 87 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 TMEM42Q69YG0 159 aa12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 ZNF324BQ6AW86 544 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 HSD17B10Q99714 261 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1B-201ENST00000376259 SLC17A3O00476 420 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms