RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 HYPMO75409 117 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 PSMB1P20618 241 aaKnown RBP4.05□□□□□ -1.76
SCN1A-202ENST00000375405 UCP1P25874 307 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 ATP6V0CP27449 155 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 RPS4XP62701 263 aaKnown RBP4.05□□□□□ -1.76
SCN1A-202ENST00000375405 FAAP20Q6NZ36 180 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 NIT1Q86X76 327 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 RANBP9Q96S59 729 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 NPCDR1Q9BY65 106 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 S4R3C0 116 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 USP32Q8NFA0 1604 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 TRBV4-1A0A0J9YWV2 114 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 RNF222A6NCQ9 220 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 CD160O95971 181 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 CTSBP07858 339 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 DSCR4P56555 118 aaPredicted RBP4.05□□□□□ -1.76
SCN1A-202ENST00000375405 RPL15P61313 204 aaKnown RBP4.05□□□□□ -1.76
SCN1A-202ENST00000375405 SPATA45Q537H7 98 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 EMC4Q5J8M3 183 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 TMEM255AQ5JRV8 349 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 FAM78AQ5JUQ0 283 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 ANKRD37Q7Z713 158 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 C1orf210Q8IVY1 113 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 ST6GALNAC3Q8NDV1 305 aa4.05□□□□□ -1.76
SCN1A-202ENST00000375405 FAM208AQ9UK61 1670 aaKnown RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 IGHV4-28A0A0C4DH34 117 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 CEACAM18A8MTB9 384 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 GASTP01350 101 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 LINC00614P0C842 121 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 RPL27AP46776 148 aaKnown RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SLC25A35Q3KQZ1 300 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 ZNF664Q8N3J9 261 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 OR8D4Q8NGM9 314 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 FAM216AQ8WUB2 273 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 TMEM255BQ8WV15 326 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 ARHGAP5-AS1Q96IT6 56 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 Q96M85 177 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SLC6A13Q9NSD5 602 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SIGLEC7Q9Y286 467 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SPAARA0A1B0GVQ0 90 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 IL6RP08887 468 aaPredicted RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 PEBP1P30086 187 aaKnown RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 DRD3P35462 400 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 TMEM167AQ8TBQ9 72 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 ALG14Q96F25 216 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 PMCHL2Q9BQD1 86 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 PRSS37A4D1T9 235 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 MPZL1O95297 269 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 IGHV3-11P01762 117 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 ADRB1P08588 477 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 CLEC18BQ6UXF7 455 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 TCF24Q7RTU0 167 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 DNAJC15Q9Y5T4 150 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 ARHGEF28Q8N1W1 1705 aaKnown RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 OCIAD2Q56VL3 154 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SLC23A3Q6PIS1 610 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SRSF12Q8WXF0 261 aaKnown RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 ASB10Q8WXI3 467 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 QTRT1Q9BXR0 403 aaKnown RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 C7orf69Q9H7B7 122 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 FUT9Q9Y231 359 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 NPIPB4C9JG80 1138 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 G3V2L1 256 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 M0R2P5 195 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 GGCTO75223 188 aaKnown RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 CD14P08571 375 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 CD28P10747 220 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 FXYD7P58549 80 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 POU2AF1Q16633 256 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SLC37A2Q8TED4 501 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 CACNG8Q8WXS5 425 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 PHF7Q9BWX1 381 aaPredicted RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 OPN3Q9H1Y3 402 aaPredicted RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 G6PC2Q9NQR9 355 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 RNF7Q9UBF6 113 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SRRM4A7MD48 611 aaKnown RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 OR11H12B2RN74 326 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SFTA3P0C7M3 94 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SRD5A2P31213 254 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 IFI27P40305 119 aaPredicted RBP4.04□□□□□ -1.76
SCN1A-202ENST00000375405 GUCA2AQ02747 115 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 TCTN3Q6NUS6 607 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 PRSS54Q6PEW0 395 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 ORMDL3Q8N138 153 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 OR11H1Q8NG94 326 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 OR11H2Q8NH07 326 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 SLC50A1Q9BRV3 221 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 NRN1Q9NPD7 142 aa4.04□□□□□ -1.76
SCN1A-202ENST00000375405 PPIAL4EA0A075B759 164 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 IGHV3OR16-8A0A075B7F1 116 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 ZNF840PA6NDX5 716 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 PPIAL4DF5H284 164 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 F6UB75 175 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 IGHV3-48P01763 117 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 CD5P06127 495 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 PPIAL4FP0DN26 164 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 DEFB130BP0DP73 79 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 DEFB130AP0DP74 79 aa4.03□□□□□ -1.76
SCN1A-202ENST00000375405 CST5P28325 142 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-202ENST00000375405 PSG9Q00887 426 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms