RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 RPS27AP62979 156 aaKnown RBP10.72□□□□□ -0.69
PTCH1-202ENST00000375271 RTL8BQ17RB0 113 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 RBM48Q5RL73 367 aaKnown RBP10.72□□□□□ -0.69
PTCH1-202ENST00000375271 DEFB125Q8N687 156 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 LINC00476Q8WZB0 136 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 PGLYRP3Q96LB9 341 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 URM1Q9BTM9 101 aaKnown RBP10.72□□□□□ -0.69
PTCH1-202ENST00000375271 PARP12Q9H0J9 701 aaKnown RBP10.72□□□□□ -0.69
PTCH1-202ENST00000375271 OR1A1Q9P1Q5 309 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 CLEC2DQ9UHP7 191 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 RBM7Q9Y580 266 aaKnown RBP10.72□□□□□ -0.69
PTCH1-202ENST00000375271 RBMY1BA6NDE4 496 aaKnown RBP10.71□□□□□ -0.69
PTCH1-202ENST00000375271 RBMY1EA6NEQ0 496 aaKnown RBP10.71□□□□□ -0.69
PTCH1-202ENST00000375271 RBMY1DP0C7P1 496 aaKnown RBP10.71□□□□□ -0.69
PTCH1-202ENST00000375271 APELAP0DMC3 54 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 MAP2K4P45985 399 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 PMS2P11Q13670 270 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 EXOSC2Q13868 293 aaKnown RBP10.71□□□□□ -0.69
PTCH1-202ENST00000375271 VMA21Q3ZAQ7 101 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 CD300EQ496F6 205 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-202ENST00000375271 FAM209BQ5JX69 171 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 OR10K2Q6IF99 312 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 IL34Q6ZMJ4 242 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 ZNF383Q8NA42 475 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 SETD9Q8NE22 299 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 GGHQ92820 318 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 THAP7Q9BT49 309 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-202ENST00000375271 ST6GALNAC5Q9BVH7 336 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 C12orf4Q9NQ89 552 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 ADAM30Q9UKF2 790 aa10.71□□□□□ -0.69
PTCH1-202ENST00000375271 NUPR2A6NF83 97 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 FAM223BA6NKX1 122 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 CREBL2O60519 120 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-202ENST00000375271 WBP4O75554 376 aaKnown RBP10.7□□□□□ -0.7
PTCH1-202ENST00000375271 BRI3O95415 125 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 NAPSAO96009 420 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 TRBV12-3P01733 135 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 OR9G9P0C7N8 305 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 HTR2CP28335 458 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 TAGLNQ01995 201 aaKnown RBP10.7□□□□□ -0.7
PTCH1-202ENST00000375271 ATP5G2Q06055 141 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 DYRK1AQ13627 763 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 TNXAQ16473 311 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 FAM223AQ8IWN6 122 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-202ENST00000375271 ACOT12Q8WYK0 555 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 AGMATQ9BSE5 352 aa10.7□□□□□ -0.7
PTCH1-202ENST00000375271 SMPD3Q9NY59 655 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-202ENST00000375271 BPNT1O95861 308 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 CD7P09564 240 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 RRASP10301 218 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 RHOGP84095 191 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 PJVKQ0ZLH3 352 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 ZNF880Q6PDB4 577 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 CYGBQ8WWM9 190 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 CYYR1Q96J86 154 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 NICN1Q9BSH3 213 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 OR2D2Q9H210 308 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 RDH8Q9NYR8 311 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 AK3Q9UIJ7 227 aa10.69□□□□□ -0.7
PTCH1-202ENST00000375271 EFCAB10A6NFE3 127 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 MSGN1A6NI15 193 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 SERPINB10P48595 397 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 WNT4P56705 351 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 ST3GAL4Q11206 333 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 TPBGQ13641 420 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 LINC00322Q6ZN03 302 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-202ENST00000375271 PTX4Q96A99 478 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 CMSS1Q9BQ75 279 aaKnown RBP10.68□□□□□ -0.7
PTCH1-202ENST00000375271 HDHD3Q9BSH5 251 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-202ENST00000375271 TM2D1Q9BX74 207 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 WFDC10AQ9H1F0 79 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 PLGRKTQ9HBL7 147 aa10.68□□□□□ -0.7
PTCH1-202ENST00000375271 TECRQ9NZ01 308 aaKnown RBP10.68□□□□□ -0.7
PTCH1-202ENST00000375271 TRBV6-6A0A0A6YYG2 114 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 DPPA5A6NC42 116 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 BET1O15155 118 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 NDUFB8O95169 186 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 SCTP09683 121 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 RANBP1P43487 201 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 LINC00205P59089 165 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 ANKRD55Q3KP44 614 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 SLC25A42Q86VD7 318 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 MS4A15Q8N5U1 240 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 OR52B4Q8NGK2 314 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 SPIN2AQ99865 258 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 SPIN2BQ9BPZ2 258 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 GGTLC1Q9BX51 225 aa10.67□□□□□ -0.7
PTCH1-202ENST00000375271 KLK5Q9Y337 293 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-202ENST00000375271 ALMS1Q8TCU4 4167 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 LOC102724200A0A096LPH7 203 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-202ENST00000375271 ERICH4A6NGS2 130 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 TRDCB7Z8K6 153 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 BMPR1BO00238 502 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 CD1AP06126 327 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 FOLR2P14207 255 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 SNRPBP14678 240 aaKnown RBP10.66□□□□□ -0.7
PTCH1-202ENST00000375271 SRMP19623 302 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 DEFB114Q30KQ6 69 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 ACSM3Q53FZ2 586 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms