RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 FBP1P09467 338 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A15PP0C7V4 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A13PP0C7W8 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A14PP0C7W9 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 FAM90A24PP0C7X0 464 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 HOXA5P20719 270 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 EWSR1Q01844 656 aaKnown RBP eCLIP17.02■□□□□ 0.31
SYNC-201ENST00000373484 ZNF154Q13106 437 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 OR2C3Q8N628 320 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 LINC00469Q8N7U9 141 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 TOMM40LQ969M1 308 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 TMEM56Q96MV1 263 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 HIST1H2AAQ96QV6 131 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 TMEM56-RWDD3S4R434 201 aa17.02■□□□□ 0.31
SYNC-201ENST00000373484 hCG_1809904A0A1W2PP81 198 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 A0A1W2PR64 198 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 A0A1W2PRV1 198 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 TMEM210A6NLX4 147 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 ZNF732B4DXR9 585 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 CLN5O75503 358 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 CYB5R3P00387 301 aaPredicted RBP17.01■□□□□ 0.31
SYNC-201ENST00000373484 HERV-K104P61576 105 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 BAXQ07812 192 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 TAF9Q16594 264 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 PLCXD3Q63HM9 321 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 OSR2Q8N2R0 312 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 OR5A2Q8NGI9 324 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 OR10G4Q8NGN3 311 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 OR11L1Q8NGX0 322 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 CD300LFQ8TDQ1 290 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 ISOC2Q96AB3 205 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 GPR173Q9NS66 373 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 RCL1Q9Y2P8 373 aaKnown RBP17.01■□□□□ 0.31
SYNC-201ENST00000373484 DMRT1Q9Y5R6 373 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 ABCA2Q9BZC7 2435 aa17.01■□□□□ 0.31
SYNC-201ENST00000373484 RBFOX3A6NFN3 312 aa17■□□□□ 0.31
SYNC-201ENST00000373484 LRRC30A6NM36 301 aa17■□□□□ 0.31
SYNC-201ENST00000373484 TRDCB7Z8K6 153 aa17■□□□□ 0.31
SYNC-201ENST00000373484 WNT9BO14905 357 aa17■□□□□ 0.31
SYNC-201ENST00000373484 PDCD6O75340 191 aa17■□□□□ 0.31
SYNC-201ENST00000373484 DIRAS3O95661 229 aa17■□□□□ 0.31
SYNC-201ENST00000373484 HSPB1P04792 205 aaKnown RBP17■□□□□ 0.31
SYNC-201ENST00000373484 RAB2AP61019 212 aa17■□□□□ 0.31
SYNC-201ENST00000373484 DMRTC1Q5HYR2 192 aa17■□□□□ 0.31
SYNC-201ENST00000373484 C11orf53Q8IXP5 236 aa17■□□□□ 0.31
SYNC-201ENST00000373484 C1orf87Q8N0U7 546 aa17■□□□□ 0.31
SYNC-201ENST00000373484 BORCS8Q96FH0 119 aa17■□□□□ 0.31
SYNC-201ENST00000373484 FAM230AA0A1W2PPH8 454 aa17■□□□□ 0.31
SYNC-201ENST00000373484 LRP5LA4QPB2 252 aa17■□□□□ 0.31
SYNC-201ENST00000373484 OR5B21A6NL26 309 aa17■□□□□ 0.31
SYNC-201ENST00000373484 GPM6AP51674 278 aa17■□□□□ 0.31
SYNC-201ENST00000373484 FUT6P51993 359 aa17■□□□□ 0.31
SYNC-201ENST00000373484 CD81P60033 236 aa17■□□□□ 0.31
SYNC-201ENST00000373484 GNG3P63215 75 aa17■□□□□ 0.31
SYNC-201ENST00000373484 SP6Q3SY56 376 aa17■□□□□ 0.31
SYNC-201ENST00000373484 FAM209BQ5JX69 171 aa17■□□□□ 0.31
SYNC-201ENST00000373484 Q8NFD4 153 aa17■□□□□ 0.31
SYNC-201ENST00000373484 OR13D1Q8NGV5 346 aa17■□□□□ 0.31
SYNC-201ENST00000373484 FAM213BQ8TBF2 198 aa17■□□□□ 0.31
SYNC-201ENST00000373484 RBMXL1Q96E39 390 aaKnown RBP17■□□□□ 0.31
SYNC-201ENST00000373484 TOLLIPQ9H0E2 274 aa17■□□□□ 0.31
SYNC-201ENST00000373484 TMEM222Q9H0R3 208 aa17■□□□□ 0.31
SYNC-201ENST00000373484 FBXO7Q9Y3I1 522 aa17■□□□□ 0.31
SYNC-201ENST00000373484 MPPED1O15442 326 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 TGOLN2O43493 480 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 HBE1P02100 147 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 IRF2P14316 349 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 NQO2P16083 231 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 CDX1P47902 265 aaPredicted RBP16.99■□□□□ 0.31
SYNC-201ENST00000373484 NHLH2Q02577 135 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 ZNF826PQ6ZT77 177 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 OR52M1Q8NGK5 317 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 CLDND2Q8NHS1 167 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 PARP12Q9H0J9 701 aaKnown RBP16.99■□□□□ 0.31
SYNC-201ENST00000373484 SH3BGRL3Q9H299 93 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 LYRM2Q9NU23 88 aaPredicted RBP16.99■□□□□ 0.31
SYNC-201ENST00000373484 RNF7Q9UBF6 113 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 ABCA1O95477 2261 aa16.99■□□□□ 0.31
SYNC-201ENST00000373484 B4DEV8 164 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 FHITP49789 147 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 TMEM249Q2WGJ8 235 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 TMEM182Q6ZP80 229 aaPredicted RBP16.98■□□□□ 0.31
SYNC-201ENST00000373484 HSD17B11Q8NBQ5 300 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 TRAV1-1A0A0B4J248 108 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 C3orf85A0A1B0GTC6 90 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 A0A1W2PPE2 198 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 PHF1O43189 567 aaPredicted RBP16.98■□□□□ 0.31
SYNC-201ENST00000373484 FSTL3O95633 263 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 NKX2-1P43699 371 aaPredicted RBP16.98■□□□□ 0.31
SYNC-201ENST00000373484 ZNF506Q5JVG8 444 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 SPSB3Q6PJ21 355 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 WDR82Q6UXN9 313 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 SLC35E3Q7Z769 313 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 SLC35G3Q8N808 338 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 SCCPDHQ8NBX0 429 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 OR2G3Q8NGZ4 309 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 IL22RA2Q969J5 263 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 SMR3AQ99954 134 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 OR51I2Q9H344 312 aa16.98■□□□□ 0.31
SYNC-201ENST00000373484 SLC7A11Q9UPY5 501 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms