RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 MRPS11P82912 194 aaKnown RBP11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 PPIAL4AQ9Y536 164 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 S1PR2O95136 353 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 MUC1P15941 1255 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 CSRP1P21291 193 aaKnown RBP11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 TMEM258P61165 79 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 FAM27BQ5VT28 67 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 MRAP2Q96G30 205 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 RASL11BQ9BPW5 248 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 SEBOXQ9HB31 216 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 THYN1Q9P016 225 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 LOC105371267A0A1B0GV96 52 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 ASAH2BP0C7U1 165 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 UCP2P55851 309 aa11.52□□□□□ -0.57
RAPGEF1-201ENST00000372189 MELTFP08582 738 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 ESDP10768 282 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 TNFSF10P50591 281 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 IFITM2Q01629 132 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 HSPB9Q9BQS6 159 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 SFXN3Q9BWM7 321 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 WIPI2Q9Y4P8 454 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 PAGE4O60829 102 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 ANKRD55Q3KP44 614 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 HSD17B10Q99714 261 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 CISD1Q9NZ45 108 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 TUBD1Q9UJT1 453 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 OTOFQ9HC10 1997 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 CTXND1A0A1B0GTU2 59 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 FAM157AC9JC47 383 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 ATP6V0CP27449 155 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 HOXA6P31267 233 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 TGIF2LYQ8IUE0 185 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 SCNM1Q9BWG6 230 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 TGFAP01135 160 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 GZMHP20718 246 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 CDX1P47902 265 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 DCAF12L2Q5VW00 463 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 RBKSQ9H477 322 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 F12P00748 615 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 TMEM50BP56557 158 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 PSG5Q15238 335 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 SRD5A3Q9H8P0 318 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 C1RLQ9NZP8 487 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 ZDHHC8Q9ULC8 765 aa11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 SIRT4Q9Y6E7 314 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF1-201ENST00000372189 SRSF10O75494 262 aaKnown RBP11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 GAPDHP04406 335 aaKnown RBP11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 RCC1P18754 421 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 ZNF660Q6AZW8 331 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 C16orf82Q7Z2V1 217 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 C7orf71A4D174 169 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 APOMO95445 188 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 PSG4Q00888 419 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 TNXAQ16473 311 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 LINC00596Q86U02 117 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 H1FOOQ8IZA3 346 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR8A1Q8NGG7 326 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 MRPL30Q8TCC3 161 aaKnown RBP11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 DLEU1O43261 78 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 CXorf1O96002 111 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 APCSP02743 223 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR4P4Q8NGL7 312 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 SLC25A10Q9UBX3 287 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 IGSF23A1L1A6 192 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 VPREB1P12018 145 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 LGALS7P47929 136 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 P2RY4P51582 365 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 SLAQ13239 276 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 TMEM255AQ5JRV8 349 aa11.5□□□□□ -0.57
RAPGEF1-201ENST00000372189 CCL8P80075 99 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 RIGQ13278 110 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR10S1Q8NGN2 331 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 ZNF519Q8TB69 540 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 IGLV3-21P80748 117 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 Q71RC1 249 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 PUSL1Q8N0Z8 303 aaKnown RBP11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 VSTM2AQ8TAG5 236 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 GRAMD2BQ96HH9 432 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 DNAL4O96015 105 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 P01737 135 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 RNASE1P07998 156 aaKnown RBP11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 PMELP40967 661 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 S100A7L2Q5SY68 101 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 HSF4Q9ULV5 492 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 A0A1W2PP11 408 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 ORM2P19652 201 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 MMP16P51512 607 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 HERPUD1Q15011 391 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 PRSS53Q2L4Q9 553 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 ZBTB34Q8NCN2 500 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR1K1Q8NGR3 316 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR1P1Q8NH06 330 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 CDC42EP3Q9UKI2 254 aa11.49□□□□□ -0.57
RAPGEF1-201ENST00000372189 OR2W1Q9Y3N9 320 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms