RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 UBTD1Q9HAC8 227 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 PLA2G2EQ9NZK7 142 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 IL19Q9UHD0 177 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 TANC2Q9HCD6 1990 aa11.7□□□□□ -0.54
LDB3-204ENST00000372066 DEFB108AA8MXU0 73 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 ATP6V1G2-DDX39BF2Z307 99 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 C15orf65H3BRN8 121 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 TOR1AO14656 332 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 SIAH2O43255 324 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 TXNL1O43396 289 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 CD5P06127 495 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
LDB3-204ENST00000372066 EGR1P18146 543 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 PTAFRP25105 342 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 CD40P25942 277 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 GLIPR1P48060 266 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 PAX9P55771 341 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 MIDNQ504T8 468 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 DPPA3Q6W0C5 159 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 CIARTQ8N365 385 aaPredicted RBP11.69□□□□□ -0.54
LDB3-204ENST00000372066 BOLLQ8N9W6 283 aaKnown RBP11.69□□□□□ -0.54
LDB3-204ENST00000372066 HSD17B11Q8NBQ5 300 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 OR52L2PQ8NGH6 319 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 OR13A1Q8NGR1 328 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 OR5C1Q8NGR4 320 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 Q96MF0 132 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 PARP12Q9H0J9 701 aaKnown RBP11.69□□□□□ -0.54
LDB3-204ENST00000372066 C19orf12Q9NSK7 152 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 OR6C3Q9NZP0 311 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 DNHD1Q96M86 4753 aa11.69□□□□□ -0.54
LDB3-204ENST00000372066 PRR14LQ5THK1 2151 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 IGKV1D-17A0A075B6S4 117 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 ODAMA1E959 279 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 BTBD17A6NE02 478 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 RNASEK-C17orf49H0YIS7 233 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 C16orf97H3BN30 126 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 K7N7A8 449 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 SMAD7O15105 426 aaKnown RBP11.68□□□□□ -0.54
LDB3-204ENST00000372066 SCAF4O95104 1147 aaKnown RBP11.68□□□□□ -0.54
LDB3-204ENST00000372066 SNAPINO95295 136 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 TMEM50AO95807 157 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 PRH1P02810 166 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 MUC1P15941 1255 aaPredicted RBP11.68□□□□□ -0.54
LDB3-204ENST00000372066 DYNLT3P51808 116 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 ZNF273Q14593 569 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 PEA15Q15121 130 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 TMEM30BQ3MIR4 351 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 MOGAT3Q86VF5 341 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 ZNF561Q8N587 486 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 UBALD1Q8TB05 177 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 Q8TCH9 128 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 CD300LFQ8TDQ1 290 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 ITLN1Q8WWA0 313 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 CCL19Q99731 98 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 SMDT1Q9H4I9 107 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
LDB3-204ENST00000372066 DSCAML1Q8TD84 2053 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 A0A1B0GW64 132 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 YPEL1O60688 119 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 LY86O95711 162 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 IFNA5P01569 189 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 P0C879 139 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 ADCYAP1P18509 176 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 ATP6V0CP27449 155 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 ARHGDIBP52566 201 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 HBG1P69891 147 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 HBG2P69892 147 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 CLINT1Q14677 625 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 PRSS57Q6UWY2 283 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 ODF3L1Q8IXM7 274 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 OR2G3Q8NGZ4 309 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 PERPQ96FX8 193 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 YPEL2Q96QA6 119 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 PBDC1Q9BVG4 233 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 PARD6GQ9BYG4 376 aaPredicted RBP11.67□□□□□ -0.54
LDB3-204ENST00000372066 MRPL37Q9BZE1 423 aaKnown RBP11.67□□□□□ -0.54
LDB3-204ENST00000372066 MS4A7Q9GZW8 240 aaPredicted RBP11.67□□□□□ -0.54
LDB3-204ENST00000372066 HIPK2Q9H2X6 1198 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 RNF7Q9UBF6 113 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 KPTNQ9Y664 436 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 F2RL2O00254 374 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 RAB29O14966 203 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 SPRY3O43610 288 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 OR8U8P0C7N1 319 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 CTRB1P17538 263 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 CCKARP32238 428 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 SSTR5P35346 364 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
LDB3-204ENST00000372066 SNCAP37840 140 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 TNFAIP6P98066 277 aaPredicted RBP11.67□□□□□ -0.54
LDB3-204ENST00000372066 ZNF616Q08AN1 781 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 CTRB2Q6GPI1 263 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 FAM122CQ6P4D5 195 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 FGFRL1Q8N441 504 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.67□□□□□ -0.54
LDB3-204ENST00000372066 TCTEX1D2Q8WW35 142 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 AIFM2Q9BRQ8 373 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 FAM234AQ9H0X4 552 aa11.67□□□□□ -0.54
LDB3-204ENST00000372066 PSENENQ9NZ42 101 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms