RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 DLEC1Q9Y238 1755 aa19.02■□□□□ 0.64
TM9SF3-201ENST00000371142 ARF6P62330 175 aa19.02■□□□□ 0.64
TM9SF3-201ENST00000371142 VKORC1L1Q8N0U8 176 aa19.02■□□□□ 0.64
TM9SF3-201ENST00000371142 H3BTX0 84 aa19.02■□□□□ 0.64
TM9SF3-201ENST00000371142 TRGC2P03986 189 aa19.02■□□□□ 0.64
TM9SF3-201ENST00000371142 PIMREGQ9BSJ6 248 aa19.02■□□□□ 0.64
TM9SF3-201ENST00000371142 EPOPA6NHQ4 379 aa19.02■□□□□ 0.63
TM9SF3-201ENST00000371142 ZG16O60844 167 aa19.02■□□□□ 0.63
TM9SF3-201ENST00000371142 ADIPOQQ15848 244 aa19.02■□□□□ 0.63
TM9SF3-201ENST00000371142 SLC25A38Q96DW6 304 aa19.02■□□□□ 0.63
TM9SF3-201ENST00000371142 HERPUD1Q15011 391 aa19.01■□□□□ 0.63
TM9SF3-201ENST00000371142 IGHV3OR16-10A0A075B7F0 116 aa19.01■□□□□ 0.63
TM9SF3-201ENST00000371142 SELENOTP62341 195 aa19.01■□□□□ 0.63
TM9SF3-201ENST00000371142 SMAGPQ0VAQ4 97 aa19.01■□□□□ 0.63
TM9SF3-201ENST00000371142 ABHD12Q8N2K0 398 aa19.01■□□□□ 0.63
TM9SF3-201ENST00000371142 QSER1Q2KHR3 1735 aa19.01■□□□□ 0.63
TM9SF3-201ENST00000371142 RARRES2Q99969 163 aa19.01■□□□□ 0.63
TM9SF3-201ENST00000371142 MEF2BQ02080 365 aaPredicted RBP19.01■□□□□ 0.63
TM9SF3-201ENST00000371142 PLXNB2O15031 1838 aa19■□□□□ 0.63
TM9SF3-201ENST00000371142 WNT9BO14905 357 aa19■□□□□ 0.63
TM9SF3-201ENST00000371142 S1PR2O95136 353 aa19■□□□□ 0.63
TM9SF3-201ENST00000371142 DDB2Q92466 427 aa19■□□□□ 0.63
TM9SF3-201ENST00000371142 PKIBQ9C010 78 aa19■□□□□ 0.63
TM9SF3-201ENST00000371142 MFAP4P55083 255 aa19■□□□□ 0.63
TM9SF3-201ENST00000371142 ARL14EPLP0DKL9 152 aa19■□□□□ 0.63
TM9SF3-201ENST00000371142 NUDT3O95989 172 aa19■□□□□ 0.63
TM9SF3-201ENST00000371142 SGK494Q96LW2 274 aa19■□□□□ 0.63
TM9SF3-201ENST00000371142 TRIP12Q14669 1992 aaPredicted RBP19■□□□□ 0.63
TM9SF3-201ENST00000371142 WDR25Q64LD2 544 aaPredicted RBP18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 LOXL4Q96JB6 756 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 GLIPR1P48060 266 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 NPBWR2P48146 333 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 PRSS8Q16651 343 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 SH3BGRL3Q9H299 93 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 SHANK3Q9BYB0 1731 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 TRBV5-7A0A0A0MS05 114 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 COTL1Q14019 142 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 C2orf83Q53S99 150 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 CDC42EP3Q9UKI2 254 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 CX3CL1P78423 397 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 TMEM177Q53S58 311 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 ZNF660Q6AZW8 331 aaPredicted RBP18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 STPG3Q8N7X2 389 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 NEU1Q99519 415 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A10PA6NDY2 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A18PA6NE21 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A16PA6NEW6 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A20PA6NIJ5 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A8PA6NJQ4 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A7PA6NKC0 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A22PA8MWA6 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A12PA8MX19 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A5PA8MXJ8 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A23PA8MXZ1 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A15PP0C7V4 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A13PP0C7W8 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A14PP0C7W9 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM90A24PP0C7X0 464 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 SPATA45Q537H7 98 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 SMDT1Q9H4I9 107 aa18.99■□□□□ 0.63
TM9SF3-201ENST00000371142 C1orf100Q5SVJ3 147 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 WNT5BQ9H1J7 359 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 PHLDA3Q9Y5J5 127 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 MARCH11A6NNE9 402 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 NPIPB6E9PJ23 425 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 IGHV3-48P01763 117 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 RNF115Q9Y4L5 304 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 TCF21O43680 179 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 SP9P0CG40 484 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 ANOS1P23352 680 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 GPR61Q9BZJ8 451 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 G6PC2Q9NQR9 355 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 RP1L1Q8IWN7 2480 aaPredicted RBP18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 ZFC3H1O60293 1989 aaKnown RBP18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 TGIF2-C20orf24A0A0A6YYL0 155 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 GREM1O60565 184 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 HSPB1P04792 205 aaKnown RBP18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 FCARP24071 287 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 LSM10Q969L4 123 aaKnown RBP18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 FAM181BA6NEQ2 426 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 RNASE1P07998 156 aaKnown RBP18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 TNFRSF9Q07011 255 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 ARID1AO14497 2285 aa18.98■□□□□ 0.63
TM9SF3-201ENST00000371142 C17orf51A8MQB3 221 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 MRPL18Q9H0U6 180 aaKnown RBP18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 DNLZQ5SXM8 178 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 ZNF818PQ6ZRF7 136 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 A0A1W2PQM1 296 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 H0YL77 283 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 OTX1P32242 354 aaPredicted RBP18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 SMUG1Q53HV7 270 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 PCSK4Q6UW60 755 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 DNAJC4Q9NNZ3 241 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 PIN1P1O15428 100 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 STARD6P59095 220 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 ATP5G2Q06055 141 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 PCOLCEQ15113 449 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 IGKV1D-42A0A075B6H8 117 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 LOC105371242A0A075B767 164 aa18.97■□□□□ 0.63
TM9SF3-201ENST00000371142 NMBP08949 121 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms