RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 MGST3O14880 152 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 CHST1O43916 411 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 GYPAP02724 150 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 MUC1P15941 1255 aaPredicted RBP14.28□□□□□ -0.12
UBE3D-203ENST00000369747 PAX9P55771 341 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 VAMP2P63027 116 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 PXDC1Q5TGL8 231 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 STUMQ69YW2 141 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 UQCC3Q6UW78 93 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 TMEM252Q8N6L7 170 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 ZNF525Q8N782 197 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 ZNRF1Q8ND25 227 aa14.28□□□□□ -0.12
UBE3D-203ENST00000369747 RNASE11Q8TAA1 199 aaKnown RBP14.28□□□□□ -0.12
UBE3D-203ENST00000369747 K7N7A8 449 aa14.27□□□□□ -0.12
UBE3D-203ENST00000369747 SPINT2O43291 252 aa14.27□□□□□ -0.12
UBE3D-203ENST00000369747 MED6O75586 246 aa14.27□□□□□ -0.12
UBE3D-203ENST00000369747 RPL30P62888 115 aaKnown RBP14.27□□□□□ -0.12
UBE3D-203ENST00000369747 HTD2P86397 168 aa14.27□□□□□ -0.12
UBE3D-203ENST00000369747 AVPI1Q5T686 147 aa14.27□□□□□ -0.12
UBE3D-203ENST00000369747 DUX4L9Q6RFH8 374 aaPredicted RBP14.27□□□□□ -0.12
UBE3D-203ENST00000369747 PPP1R35Q8TAP8 253 aa14.27□□□□□ -0.12
UBE3D-203ENST00000369747 SLC25A31Q9H0C2 315 aa14.27□□□□□ -0.12
UBE3D-203ENST00000369747 MMP26Q9NRE1 261 aa14.27□□□□□ -0.12
UBE3D-203ENST00000369747 CACNG5Q9UF02 275 aa14.27□□□□□ -0.12
UBE3D-203ENST00000369747 SELLP14151 372 aa14.27□□□□□ -0.13
UBE3D-203ENST00000369747 AKR1C2P52895 323 aa14.27□□□□□ -0.13
UBE3D-203ENST00000369747 MSMO1Q15800 293 aa14.27□□□□□ -0.13
UBE3D-203ENST00000369747 CR1LQ2VPA4 569 aa14.27□□□□□ -0.13
UBE3D-203ENST00000369747 PERPQ96FX8 193 aa14.27□□□□□ -0.13
UBE3D-203ENST00000369747 CHODLQ9H9P2 273 aa14.27□□□□□ -0.13
UBE3D-203ENST00000369747 PDZD2O15018 2839 aa14.26□□□□□ -0.13
UBE3D-203ENST00000369747 TRAV38-1A0A0B4J264 116 aa14.26□□□□□ -0.13
UBE3D-203ENST00000369747 NUDT19A8MXV4 375 aa14.26□□□□□ -0.13
UBE3D-203ENST00000369747 WRBO00258 174 aa14.26□□□□□ -0.13
UBE3D-203ENST00000369747 PPIHO43447 177 aaKnown RBP14.26□□□□□ -0.13
UBE3D-203ENST00000369747 SEC11BP0C7V7 166 aa14.26□□□□□ -0.13
UBE3D-203ENST00000369747 SPP1P10451 314 aa14.26□□□□□ -0.13
UBE3D-203ENST00000369747 ATP5J2P56134 94 aa14.26□□□□□ -0.13
UBE3D-203ENST00000369747 CCL13Q99616 98 aa14.26□□□□□ -0.13
UBE3D-203ENST00000369747 RAMP3O60896 148 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 GZMHP20718 246 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 OMGP23515 440 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 IL34Q6ZMJ4 242 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 AGMATQ9BSE5 352 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 HRH4Q9H3N8 390 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 SIGLEC5O15389 551 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 TMPRSS2O15393 492 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 IGHV2-70P01814 119 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 BRWD1-AS2P59051 145 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 BLOC1S1P78537 153 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 SRSF3P84103 164 aaKnown RBP14.25□□□□□ -0.13
UBE3D-203ENST00000369747 PJVKQ0ZLH3 352 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 CLINT1Q14677 625 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 BTNL8Q6UX41 500 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 LYPD2Q6UXB3 125 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 BTNL3Q6UXE8 466 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 ZNF788Q6ZQV5 615 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 FAM216BQ8N7L0 139 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 MS4A7Q9GZW8 240 aaPredicted RBP14.25□□□□□ -0.13
UBE3D-203ENST00000369747 SH3BGRL3Q9H299 93 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 PARP11Q9NR21 331 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 FAM212BQ9NTI7 297 aaPredicted RBP14.25□□□□□ -0.13
UBE3D-203ENST00000369747 PSG11Q9UQ72 335 aa14.25□□□□□ -0.13
UBE3D-203ENST00000369747 SVEP1Q4LDE5 3571 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 TNFRSF13BO14836 293 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-203ENST00000369747 ST8SIA5O15466 376 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 CST7O76096 145 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 AKR1C1Q04828 323 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 BAXQ07812 192 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 LTC4SQ16873 150 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 Q6ZRG5 221 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 FGFRL1Q8N441 504 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 ZNF561Q8N587 486 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 HSD17B11Q8NBQ5 300 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 SDSLQ96GA7 329 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 GAFA1Q96PS6 74 aa14.24□□□□□ -0.13
UBE3D-203ENST00000369747 C17orf98A8MV24 154 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 DYNLT3P51808 116 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 EDDM3BP56851 147 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 CATR1Q13166 79 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 OR2B11Q5JQS5 317 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 OR5C1Q8NGR4 320 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 NARS2Q96I59 477 aaKnown RBP14.23□□□□□ -0.13
UBE3D-203ENST00000369747 RAB40CQ96S21 281 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 TMA7Q9Y2S6 64 aaKnown RBP14.23□□□□□ -0.13
UBE3D-203ENST00000369747 F2RL2O00254 374 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 FCN3O75636 299 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 APOC3P02656 99 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 P0C879 139 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 LOXL3P58215 753 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 ZNF266Q14584 549 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 MORN2Q502X0 79 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 LYPD6BQ8NI32 183 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 TCTEX1D2Q8WW35 142 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 RAB1CQ92928 201 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 TIMD4Q96H15 378 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 NCOR1P1Q9H4R4 102 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 ZNF665Q9H7R5 613 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 JPT1Q9UK76 154 aa14.23□□□□□ -0.13
UBE3D-203ENST00000369747 MMP24Q9Y5R2 645 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms