RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 TRAV6A0A075B6T7 132 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 SULT1C2O00338 296 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 RAB29O14966 203 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 CD1BP29016 333 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 SLC6A1P30531 599 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 PROK1P58294 105 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 TMEM95Q3KNT9 176 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 HOGA1Q86XE5 327 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 H1FOOQ8IZA3 346 aaPredicted RBP12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 Q8N6K4 173 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR4C16Q8NGL9 310 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 WFDC12Q8WWY7 111 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 C5orf30Q96GV9 206 aa12.02□□□□□ -0.49
SMPDL3A-201ENST00000368440 A0A1B0GUS0 222 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 HAX1O00165 279 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 PFDN1O60925 122 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR8U9P0C7N5 309 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 LINC00205P59089 165 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 GLDNQ6ZMI3 551 aaPredicted RBP12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR8U1Q8NH10 309 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 ZNF747Q9BV97 191 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR2D2Q9H210 308 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 TAS2R8Q9NYW2 309 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 MOB4Q9Y3A3 225 aa12.01□□□□□ -0.49
SMPDL3A-201ENST00000368440 AKAIN1P0CW23 69 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 CT45A6P0DMU7 189 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 CT45A5P0DMU8 189 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 CT45A7P0DMV0 189 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 NFYAP23511 347 aaPredicted RBP12□□□□□ -0.49
SMPDL3A-201ENST00000368440 GPR12P47775 334 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 BCAP31P51572 246 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 ABCA11PQ4W5N1 156 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 FAM71F2Q6NXP2 309 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 STEAP1BQ6NZ63 245 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 Q8N2B8 174 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR2T10Q8NGZ9 312 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR2T6Q8NHC8 308 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 AKR1E2Q96JD6 320 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 S1PR3Q99500 378 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 C7orf50Q9BRJ6 194 aaKnown RBP12□□□□□ -0.49
SMPDL3A-201ENST00000368440 TINAGL1Q9GZM7 467 aaPredicted RBP12□□□□□ -0.49
SMPDL3A-201ENST00000368440 PRSS22Q9GZN4 317 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 NUDT15Q9NV35 164 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 RAB3DO95716 219 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 RCVRNP35243 200 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 TAS2R19P59542 299 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 CADM3Q8N126 398 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 C5orf56Q8N8D9 126 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 DRAXINQ8NBI3 349 aaPredicted RBP12□□□□□ -0.49
SMPDL3A-201ENST00000368440 DUSP18Q8NEJ0 188 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 SERTAD4Q9NUC0 356 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 ZNF221Q9UK13 617 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 ANAPC10Q9UM13 185 aa12□□□□□ -0.49
SMPDL3A-201ENST00000368440 MOSP00540 346 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 PMP2P02689 132 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 TCRBP04435 133 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 FAUP35544 74 aaKnown RBP11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 CBX5P45973 191 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 ARPC4P59998 168 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 C11orf88Q6PI97 169 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 TMEM229BQ8NBD8 167 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 RITA1Q96K30 269 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 SDHAF2Q9NX18 166 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 FLVCR2Q9UPI3 526 aa11.99□□□□□ -0.49
SMPDL3A-201ENST00000368440 CTXN2P0C2S0 81 aa11.98□□□□□ -0.49
SMPDL3A-201ENST00000368440 F2RL1P55085 397 aa11.98□□□□□ -0.49
SMPDL3A-201ENST00000368440 SSBP1Q04837 148 aaKnown RBP11.98□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR51S1Q8NGJ8 323 aa11.98□□□□□ -0.49
SMPDL3A-201ENST00000368440 GHITMQ9H3K2 345 aa11.98□□□□□ -0.49
SMPDL3A-201ENST00000368440 PLSCR3Q9NRY6 295 aa11.98□□□□□ -0.49
SMPDL3A-201ENST00000368440 IGKV1D-13A0A0B4J2D9 117 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 NAP1L6A6NFF2 107 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 INMT-MINDY4F8WBC2 141 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 M0R1X1 148 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 IGKV1-13P0DP09 117 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 CNTFRP26992 372 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 HRH1P35367 487 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 SCGB2B2Q4G0G5 96 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 C9orf152Q5JTZ5 239 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 HIST2H2BDQ6DRA6 164 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 ZNF383Q8NA42 475 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR2W1Q9Y3N9 320 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 RBM7Q9Y580 266 aaKnown RBP11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 A0A0B4J293 547 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 NCBP2LA6PVI3 153 aaKnown RBP11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 H0YJW9 148 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 FGF16O43320 207 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 TUSC2O75896 110 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 ARSJQ5FYB0 599 aaPredicted RBP11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 RNASE10Q5GAN6 216 aaKnown RBP11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 KLHDC1Q8N7A1 406 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 Q8N9W7 124 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR5AP2Q8NGF4 316 aa11.97□□□□□ -0.49
SMPDL3A-201ENST00000368440 M0QZK8 103 aa11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 VSIG10L2P0DP72 767 aa11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 NAT1P18440 290 aa11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 VDAC2P45880 294 aaPredicted RBP11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 TATDN3Q17R31 274 aa11.96□□□□□ -0.49
SMPDL3A-201ENST00000368440 OR5AN1Q8NGI8 311 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms