RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 C16orf97H3BN30 126 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 PSG2P11465 335 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 RHOBP62745 196 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 C10orf128Q5T292 105 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 HSD17B10Q99714 261 aaKnown RBP11.42□□□□□ -0.58
PTPRK-204ENST00000368210 REG4Q9BYZ8 158 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 CAMPP49913 170 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 C1QL4Q86Z23 238 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 SLC45A2Q9UMX9 530 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 VWA8A3KMH1 1905 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 CACNA1DQ01668 2161 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 MED12Q93074 2177 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 A0A0G2JK05 382 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 NCBP2LA6PVI3 153 aaKnown RBP11.42□□□□□ -0.58
PTPRK-204ENST00000368210 RND3P61587 244 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 AUP1Q9Y679 476 aa11.42□□□□□ -0.58
PTPRK-204ENST00000368210 TMEM14DPA8MWL7 114 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 DANCRP0C864 163 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 OR10S1Q8NGN2 331 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 VSTM2AQ8TAG5 236 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 NEURL1O76050 574 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 G6PCP35575 357 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 KIF26BQ2KJY2 2108 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 LRRC75AQ8NAA5 344 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 ZNF665Q9H7R5 613 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 PRR33A8MZF0 331 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 CORTO00230 105 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 CEBPDP49716 269 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-204ENST00000368210 RAB1CQ92928 201 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 FAM117AQ9C073 453 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 ACACAQ13085 2346 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BKO60814 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BJP06899 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BOP23527 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 NPY1RP25929 384 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BBP33778 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 PPP1CCP36873 323 aaKnown RBP11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BDP58876 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BCP62807 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST2H2BEQ16778 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-204ENST00000368210 C1orf174Q8IYL3 243 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BHQ93079 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BNQ99877 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BMQ99879 126 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 WNT5BQ9H1J7 359 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 TIMM9Q9Y5J7 89 aa11.41□□□□□ -0.58
PTPRK-204ENST00000368210 RALGAPA1Q6GYQ0 2036 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A10PA6NDY2 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A18PA6NE21 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A16PA6NEW6 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A20PA6NIJ5 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A8PA6NJQ4 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A7PA6NKC0 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A22PA8MWA6 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A12PA8MX19 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A5PA8MXJ8 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A23PA8MXZ1 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 AHRRA9YTQ3 701 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 PITX3O75364 302 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 SCTP09683 121 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A15PP0C7V4 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A13PP0C7W8 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A14PP0C7W9 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM90A24PP0C7X0 464 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 BTF3P20290 206 aaKnown RBP11.4□□□□□ -0.58
PTPRK-204ENST00000368210 HIST3H2BBQ8N257 126 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 IGKV1D-43A0A0B4J1Z2 117 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 DPRXA6NFQ7 191 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 ARTNQ5T4W7 220 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 NDFIP1Q9BT67 221 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 RAB1BQ9H0U4 201 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 MS4A5Q9H3V2 200 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 SYNGR1O43759 233 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 RBP4P02753 201 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 PRDX2P32119 198 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 FAM169BQ8N8A8 192 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 OR2T6Q8NHC8 308 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 MBD3L1Q8WWY6 194 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 HIST1H2BLQ99880 126 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 PRDM14Q9GZV8 571 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
PTPRK-204ENST00000368210 ZSWIM8A7E2V4 1837 aa11.4□□□□□ -0.59
PTPRK-204ENST00000368210 CTXND1A0A1B0GTU2 59 aa11.4□□□□□ -0.59
PTPRK-204ENST00000368210 H3BVH4 76 aa11.4□□□□□ -0.59
PTPRK-204ENST00000368210 C1QL1O75973 258 aa11.4□□□□□ -0.59
PTPRK-204ENST00000368210 RPS11P62280 158 aaKnown RBP eCLIP11.4□□□□□ -0.59
PTPRK-204ENST00000368210 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.59
PTPRK-204ENST00000368210 TGIF2LYQ8IUE0 185 aa11.4□□□□□ -0.59
PTPRK-204ENST00000368210 FGF11Q92914 225 aa11.4□□□□□ -0.59
PTPRK-204ENST00000368210 RAB37Q96AX2 223 aa11.4□□□□□ -0.59
PTPRK-204ENST00000368210 RFPL3SP0C7P2 107 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 COX5BP10606 129 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 TPRX1Q8N7U7 411 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 OR1K1Q8NGR3 316 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 Q96M66 194 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 IGLV3-12A0A075B6K2 115 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 IGHV3OR15-7A0A075B7D8 119 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 OR10W1Q8NGF6 305 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 TMEM54Q969K7 222 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms