RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 MT-CO2P00403 227 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 ACOT6Q3I5F7 207 aaPredicted RBP11.96□□□□□ -0.49
PARP1-203ENST00000366794 TMEM171Q8WVE6 324 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 EGLN1Q9GZT9 426 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 NBEAQ8NFP9 2946 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 PITX3O75364 302 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 SCGB1D1O95968 90 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 RPS2P15880 293 aaKnown RBP11.96□□□□□ -0.49
PARP1-203ENST00000366794 C9orf152Q5JTZ5 239 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 Q6ZRM9 215 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 DNM1P46Q6ZS02 220 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 FAM216BQ8N7L0 139 aa11.96□□□□□ -0.49
PARP1-203ENST00000366794 ODAMA1E959 279 aa11.96□□□□□ -0.5
PARP1-203ENST00000366794 ETV2O00321 342 aaPredicted RBP11.96□□□□□ -0.5
PARP1-203ENST00000366794 ZNF251Q9BRH9 671 aa11.96□□□□□ -0.5
PARP1-203ENST00000366794 SETD2Q9BYW2 2564 aaPredicted RBP11.96□□□□□ -0.5
PARP1-203ENST00000366794 GALR2O43603 387 aaPredicted RBP11.95□□□□□ -0.5
PARP1-203ENST00000366794 APOA2P02652 100 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 TRGC2P03986 189 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 UCP1P25874 307 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 MIC13Q5XKP0 118 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 MOB3BQ86TA1 216 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 SAMD10Q9BYL1 202 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 TLN2Q9Y4G6 2542 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 FAM157CP0CG43 387 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 PLA2G5P39877 138 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 THBS3P49746 956 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 GABRA6Q16445 453 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 OR5D13Q8NGL4 314 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 SLC35D1Q9NTN3 355 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 MARCH11A6NNE9 402 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 RTP5Q14D33 572 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 TMEM108Q6UXF1 575 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 HIST1H2BAQ96A08 127 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 SGK494Q96LW2 274 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 CCDC168Q8NDH2 2452 aa11.95□□□□□ -0.5
PARP1-203ENST00000366794 FAM3BP58499 235 aaPredicted RBP11.94□□□□□ -0.5
PARP1-203ENST00000366794 RPS23P62266 143 aaKnown RBP11.94□□□□□ -0.5
PARP1-203ENST00000366794 FAM78BQ5VT40 261 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 FAM216AQ8WUB2 273 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 UHRF2Q96PU4 802 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 CIB3Q96Q77 187 aaPredicted RBP11.94□□□□□ -0.5
PARP1-203ENST00000366794 SAP30LQ9HAJ7 183 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 IL36GQ9NZH8 169 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 DKK1O94907 266 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 LY86O95711 162 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 OR10J4P0C629 311 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 HIST1H3AP68431 136 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 TFF3Q07654 80 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 TMEM241Q24JQ0 296 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 HFEQ30201 348 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 C18orf12Q96KH6 178 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 TMEM147Q9BVK8 224 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 ZNF355PQ9NSJ1 428 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 CLDN34H7C241 214 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 CA11O75493 328 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 ZNF90Q03938 601 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 GCSAMLQ5JQS6 135 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 OR4P4Q8NGL7 312 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 SMIM8Q96KF7 97 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 TUBD1Q9UJT1 453 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 C11orf94C9JXX5 98 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 TMEM50AO95807 157 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 CRYABP02511 175 aaKnown RBP11.94□□□□□ -0.5
PARP1-203ENST00000366794 RBPJQ06330 500 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 TNFRSF9Q07011 255 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 ACSF3Q4G176 576 aaPredicted RBP11.94□□□□□ -0.5
PARP1-203ENST00000366794 TAF15Q92804 592 aaKnown RBP eCLIP11.94□□□□□ -0.5
PARP1-203ENST00000366794 FAM122AQ96E09 287 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 TMEM68Q96MH6 324 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 QTRT1Q9BXR0 403 aaKnown RBP11.94□□□□□ -0.5
PARP1-203ENST00000366794 PKIBQ9C010 78 aa11.94□□□□□ -0.5
PARP1-203ENST00000366794 TRBV23-1A0A0A0MS06 115 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 WT1P19544 449 aaPredicted RBP11.93□□□□□ -0.5
PARP1-203ENST00000366794 MEOX2P50222 304 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 UCP3P55916 312 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 RPL30P62888 115 aaKnown RBP11.93□□□□□ -0.5
PARP1-203ENST00000366794 RPL31P62899 125 aaKnown RBP11.93□□□□□ -0.5
PARP1-203ENST00000366794 BSXQ3C1V8 233 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 GATAD1Q8WUU5 269 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 GATA2P23769 480 aaPredicted RBP11.93□□□□□ -0.5
PARP1-203ENST00000366794 RTL8BQ17RB0 113 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 RNF212Q495C1 297 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 COMMD1Q8N668 190 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 BLNKQ8WV28 456 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 RAB24Q969Q5 203 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 MISP3Q96FF7 219 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 FAM103A1Q9BTL3 118 aaKnown RBP11.93□□□□□ -0.5
PARP1-203ENST00000366794 KIAA1456Q9P272 454 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 RNF7Q9UBF6 113 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 IGHV2OR16-5A0A0B4J2B6 119 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 PRSS44E7EML9 344 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 H0Y8G0 127 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 H3BTX0 84 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 FGF16O43320 207 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 COX5BP10606 129 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 OPRK1P41145 380 aa11.93□□□□□ -0.5
PARP1-203ENST00000366794 TMEM42Q69YG0 159 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms