RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 DFFBO76075 338 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 IFNA17P01571 189 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 HBE1P02100 147 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 DYNLT3P51808 116 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 TLE4Q04727 773 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 AKR1C8PQ5T2L2 129 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 MAGT1Q9H0U3 335 aa10.98□□□□□ -0.65
SQSTM1-201ENST00000360718 TRBV6-6A0A0A6YYG2 114 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 A0A1W2PPR1 153 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 PGLYRP1O75594 196 aaPredicted RBP10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 TFF1P04155 84 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 IGFBP2P18065 325 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 EGR1P18146 543 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 MAS1LP35410 378 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 RPL23AP62750 156 aaKnown RBP10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 FAM24BQ8N5W8 94 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 Q8TCH9 128 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 ISOC2Q96AB3 205 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 RBMXL1Q96E39 390 aaKnown RBP10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 METTL1Q9UBP6 276 aaKnown RBP10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 WIPI2Q9Y4P8 454 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 A0A1B0GV50 99 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 CHST1O43916 411 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 LHBP01229 141 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 SLC25A6P12236 298 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 DAOP14920 347 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 SRSF1Q07955 248 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■□□□□ 11.1
SQSTM1-201ENST00000360718 STX12Q86Y82 276 aa10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 PUS1Q9Y606 427 aaKnown RBP eCLIP10.97□□□□□ -0.65
SQSTM1-201ENST00000360718 IGKV1D-13A0A0B4J2D9 117 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 A0A1B0GU03 582 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 GPR37O15354 613 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 OR2C1O95371 312 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 IFNA5P01569 189 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 IGKV1-13P0DP09 117 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 F2RP25116 425 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 PRDX2P32119 198 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 CEBPDP49716 269 aaPredicted RBP10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 HERPUD1Q15011 391 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 SPSB3Q6PJ21 355 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 C1orf87Q8N0U7 546 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 OR10J5Q8NHC4 309 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 ATP5SQ99766 215 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 RARRES2Q99969 163 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 HIPK2Q9H2X6 1198 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 DCAF16Q9NXF7 216 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 OR2W1Q9Y3N9 320 aa10.96□□□□□ -0.65
SQSTM1-201ENST00000360718 CST7O76096 145 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 HSPB1P04792 205 aaKnown RBP10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 ARG1P05089 322 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 SERPINE2P07093 398 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 PSG2P11465 335 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 GABRA2P47869 451 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 MOB1BQ7L9L4 216 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 C1QL4Q86Z23 238 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 PPP1R35Q8TAP8 253 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 MRPL30Q8TCC3 161 aaKnown RBP10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 TCTEX1D2Q8WW35 142 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 RAB40CQ96S21 281 aa10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 SEBOXQ9HB31 216 aaPredicted RBP10.96□□□□□ -0.66
SQSTM1-201ENST00000360718 LRRK2Q5S007 2527 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 A0A1W2PPE2 198 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 TAS2R30P59541 319 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 COL10A1Q03692 680 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 FABP9Q0Z7S8 132 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 FAM201AQ5SY85 155 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 ZNF497Q6ZNH5 498 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 PLPPR1Q8TBJ4 325 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 IGHV3OR15-7A0A075B7D8 119 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 IGKV1-6A0A0C4DH72 117 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 TMEM30CPA0ZSE6 113 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 CYB5R3P00387 301 aaPredicted RBP10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 FABP1P07148 127 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 WNT2P09544 360 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 CCL20P78556 96 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 HLA-DRB3P79483 266 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 SLC25A24Q6NUK1 477 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 TMEM217Q8N7C4 229 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 LINC00469Q8N7U9 141 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 TRAPPC2LQ9UL33 140 aa10.95□□□□□ -0.66
SQSTM1-201ENST00000360718 DSCAML1Q8TD84 2053 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 A0A087WWC5 75 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 hCG_1809904A0A1W2PP81 198 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 A0A1W2PR64 198 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 A0A1W2PRV1 198 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 H3BQ15 152 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 AP4M1O00189 453 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 PSPNO60542 156 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 SRP19P09132 144 aaKnown RBP10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 ZNF506Q5JVG8 444 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 ZNF880Q6PDB4 577 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 CD177Q8N6Q3 437 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 RNASE11Q8TAA1 199 aaKnown RBP10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 ABHD14AQ9BUJ0 271 aa10.94□□□□□ -0.66
SQSTM1-201ENST00000360718 IGKV1D-17A0A075B6S4 117 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 TNFSF12O43508 249 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 SCAF4O95104 1147 aaKnown RBP10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 TMEM50AO95807 157 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms