RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ICAM4Q14773 271 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 Q6ZRM9 215 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 ZFP82Q8N141 532 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 TCTEX1D1Q8N7M0 179 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 CLDND2Q8NHS1 167 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 C2CD4CQ8TF44 421 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 GALMQ96C23 342 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 COQ2Q96H96 371 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 PSENENQ9NZ42 101 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 Q9UFV3 132 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 MMP24Q9Y5R2 645 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 RFNGQ9Y644 331 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 A0A1B0GV50 99 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 C5orf52A6NGY3 159 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 IFNL4K9M1U5 179 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 PPIHO43447 177 aaKnown RBP11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 PTBP3O95758 552 aaKnown RBP11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 TFF1P04155 84 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 S100A8P05109 93 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 S100A6P06703 90 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 IL2RGP31785 369 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 COL10A1Q03692 680 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 IZUMO4Q1ZYL8 232 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 SMIM21Q3B7S5 101 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 THNSL2Q86YJ6 484 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 C1QL4Q86Z23 238 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 ZNF808Q8N4W9 903 aaPredicted RBP11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 ZNF525Q8N782 197 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 ZNF645Q8N7E2 425 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 C20orf24Q9BUV8 137 aa11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 PUS1Q9Y606 427 aaKnown RBP eCLIP11.93□□□□□ -0.5
NIPAL3-203ENST00000358028 H3BQ15 152 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 UBE2CO00762 179 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 HBZP02008 142 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 ZNF83P51522 516 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 S100A12P80511 92 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 TMEM267Q0VDI3 215 aaPredicted RBP11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 LRRC75BQ2VPJ9 315 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 KRBOX4Q5JUW0 171 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 SLC35E3Q7Z769 313 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 LRRC29Q8WV35 223 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 MBD3L1Q8WWY6 194 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 YPEL4Q96NS1 127 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 C12orf57Q99622 126 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 LOC102723971A0A1B0GUV8 181 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 CXorf65A6NEN9 183 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 OR2C1O95371 312 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 CEACAM8P31997 349 aaPredicted RBP11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 TIMP3P35625 211 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 GABRA2P47869 451 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 MEOX2P50222 304 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 RPS23P62266 143 aaKnown RBP11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 HAGHQ16775 308 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 ZNF474Q6S9Z5 364 aaPredicted RBP11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 MRGPRDQ8TDS7 321 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 PINX1Q96BK5 328 aaKnown RBP11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 SIRT7Q9NRC8 400 aa11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 METTL1Q9UBP6 276 aaKnown RBP11.92□□□□□ -0.5
NIPAL3-203ENST00000358028 B4DEV8 164 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 H3BP45 60 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 M0R1B8 84 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 DAOP14920 347 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 CHRNB4P30926 498 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 CATR1Q13166 79 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 PMS2P11Q13670 270 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 MSMPQ1L6U9 139 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 TIMM23BQ5SRD1 257 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 ZNF429Q86V71 674 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 FAM24BQ8N5W8 94 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 OR2Z1Q8NG97 314 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 CA5BP1Q8WTZ4 195 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 NINJ1Q92982 152 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 ISOC2Q96AB3 205 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 S100PBPQ96BU1 408 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 RAB39BQ96DA2 213 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 TVP23CQ96ET8 276 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 LURAP1Q96LR2 239 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 TCEAL7Q9BRU2 100 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 NIPSNAP3BQ9BS92 247 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 OR2D2Q9H210 308 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 CISD1Q9NZ45 108 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 TIMM9Q9Y5J7 89 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 LRBAP50851 2863 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 DCHS2Q6V1P9 2916 aa11.91□□□□□ -0.5
NIPAL3-203ENST00000358028 A0A1W2PPE2 198 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 FAM90A27PA6NNH2 459 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 IFNA17P01571 189 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 GLIPR1P48060 266 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 UBE2KP61086 200 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 SNRPEP62304 92 aaKnown RBP11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 EIF4EBP1Q13541 118 aaPredicted RBP11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 C3orf36Q3SXR2 165 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 LILRB2Q8N423 598 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 FGFRL1Q8N441 504 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 CD177Q8N6Q3 437 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 MUCL1Q96DR8 90 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 C5orf30Q96GV9 206 aa11.9□□□□□ -0.5
NIPAL3-203ENST00000358028 HSPB7Q9UBY9 170 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms