RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 GFRA4Q9GZZ7 299 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 C1RLQ9NZP8 487 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 A0A1W2PRE2 83 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 OR2J2O76002 312 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 C8orf88P0DMB2 117 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 SUPT4H1P63272 117 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 OR10X1Q8NGY0 326 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 DENND4AQ7Z401 1863 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 SRYQ05066 204 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 OR2M7Q8NG81 312 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 A0A1B0GTH9 108 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 PPIHO43447 177 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 RPL31P62899 125 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CX3CL1P78423 397 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 SIGMAR1Q99720 223 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 TRPM7Q96QT4 1865 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 M0R2Z0 102 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 LGALS7P47929 136 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 D2HGDHQ8N465 521 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF721Q8TF20 911 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 C1QTNF5Q9BXJ0 243 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CACNA1BQ00975 2339 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 G6PCP35575 357 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CEACAM3P40198 252 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 HBBP68871 147 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 MST1LQ2TV78 715 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CCL26Q9Y258 94 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 TRIOBPQ9H2D6 2365 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 A0A1B0GV50 99 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 RBMXL3Q8N7X1 1067 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 HCFC2Q9Y5Z7 792 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 TMPRSS3P57727 454 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 SRSF6Q13247 344 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF324BQ6AW86 544 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 G6PC2Q9NQR9 355 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CA3P07451 260 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ESDP10768 282 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 YPEL3P61236 119 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 RHOGP84095 191 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 OR1C1Q15619 314 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 TCF23Q7RTU1 214 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CLEC5AQ9NY25 188 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 DYSFO75923 2080 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 C1QL1O75973 258 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 RD3LP0DJH9 198 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ELLP55199 621 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM42Q69YG0 159 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 AAMDCQ9H7C9 122 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 NTN1O95631 604 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 MGST1P10620 155 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CLDN2P57739 230 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 HERVK_113P61574 105 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 C11orf42Q8N5U0 333 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 OR4A5Q8NH83 315 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 WFDC6Q9BQY6 131 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 THSD7AQ9UPZ6 1657 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ETV2O00321 342 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF718Q3SXZ3 478 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM144Q7Z5S9 345 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 FAM173AQ9BQD7 235 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF430Q9H8G1 570 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 PAGE4O60829 102 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 UNC119Q13432 240 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 SSPNQ14714 243 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF525Q8N782 197 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF385AQ96PM9 386 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF257Q9Y2Q1 563 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 MSGN1A6NI15 193 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 PFN1P07737 140 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 SP9P0CG40 484 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 OR5AS1Q8N127 324 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 PAQR4Q8N4S7 273 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 OR52M1Q8NGK5 317 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 SLC25A2Q9BXI2 301 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 AP5S1Q9NUS5 200 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CLEC1BQ9P126 229 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 METTL12A8MUP2 240 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 FAM78BQ5VT40 261 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CRIPAKQ8N1N5 446 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 CXXC4Q9H2H0 198 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 PTPRQQ9UMZ3 2332 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ASTLQ6HA08 431 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 PDPNQ86YL7 162 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 PARLQ9H300 379 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF665Q9H7R5 613 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 CLCF1Q9UBD9 225 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 MBD1Q9UIS9 605 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 PLXNA4Q9HCM2 1894 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 Q5PR19 223 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 RNF224P0DH78 156 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 PRSS53Q2L4Q9 553 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 INO80CQ6PI98 192 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 OR9G1Q8NH87 305 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM208Q9BTX3 173 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 HS3ST3B1Q9Y662 390 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 TRBV23-1A0A0A0MS06 115 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 TBX6O95947 436 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 ONECUT2O95948 504 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 PSG5Q15238 335 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms