RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SIGLECL1Q8N7X8 197 aa20.41■□□□□ 0.86
SSBP3-202ENST00000357475 ZDHHC22Q8N966 263 aa20.41■□□□□ 0.86
SSBP3-202ENST00000357475 ENKURQ8TC29 256 aa20.41■□□□□ 0.86
SSBP3-202ENST00000357475 PIFOQ8TCI5 191 aa20.41■□□□□ 0.86
SSBP3-202ENST00000357475 DDB2Q92466 427 aa20.41■□□□□ 0.86
SSBP3-202ENST00000357475 C20orf85Q9H1P6 137 aa20.41■□□□□ 0.86
SSBP3-202ENST00000357475 TRAV6A0A075B6T7 132 aa20.4■□□□□ 0.86
SSBP3-202ENST00000357475 H0YJW9 148 aa20.4■□□□□ 0.86
SSBP3-202ENST00000357475 ARPC1BO15143 372 aaKnown RBP20.4■□□□□ 0.86
SSBP3-202ENST00000357475 ABCA11PQ4W5N1 156 aa20.4■□□□□ 0.86
SSBP3-202ENST00000357475 KCTD9Q7L273 389 aa20.4■□□□□ 0.86
SSBP3-202ENST00000357475 ZBTB34Q8NCN2 500 aa20.4■□□□□ 0.86
SSBP3-202ENST00000357475 C14orf166Q9Y224 244 aaKnown RBP20.4■□□□□ 0.86
SSBP3-202ENST00000357475 TXNL1O43396 289 aa20.39■□□□□ 0.85
SSBP3-202ENST00000357475 HABP2Q14520 560 aaPredicted RBP20.39■□□□□ 0.85
SSBP3-202ENST00000357475 CCDC144NLQ6NUI1 221 aa20.39■□□□□ 0.85
SSBP3-202ENST00000357475 CMTM1Q8IZ96 169 aa20.39■□□□□ 0.85
SSBP3-202ENST00000357475 TCTEX1D2Q8WW35 142 aa20.39■□□□□ 0.85
SSBP3-202ENST00000357475 ZNF486Q96H40 463 aaPredicted RBP20.39■□□□□ 0.85
SSBP3-202ENST00000357475 HSD17B10Q99714 261 aaKnown RBP20.39■□□□□ 0.85
SSBP3-202ENST00000357475 SSX3Q99909 188 aa20.39■□□□□ 0.85
SSBP3-202ENST00000357475 NUDT15Q9NV35 164 aa20.39■□□□□ 0.85
SSBP3-202ENST00000357475 CRLF1O75462 422 aa20.38■□□□□ 0.85
SSBP3-202ENST00000357475 ANXA7P20073 488 aaKnown RBP20.38■□□□□ 0.85
SSBP3-202ENST00000357475 THBS3P49746 956 aa20.38■□□□□ 0.85
SSBP3-202ENST00000357475 RND3P61587 244 aa20.38■□□□□ 0.85
SSBP3-202ENST00000357475 OR5AN1Q8NGI8 311 aa20.38■□□□□ 0.85
SSBP3-202ENST00000357475 RITA1Q96K30 269 aa20.38■□□□□ 0.85
SSBP3-202ENST00000357475 BEX1Q9HBH7 125 aa20.38■□□□□ 0.85
SSBP3-202ENST00000357475 MPPED1O15442 326 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 AKR1C4P17516 323 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 Q6YL49 198 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 ZNF66Q6ZN08 573 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 DUSP18Q8NEJ0 188 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 CAPSLQ8WWF8 208 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 PRDM13Q9H4Q3 707 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 COPZ2Q9P299 210 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 VGLL3A8MV65 326 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 H3BUX3 64 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 RAMP3O60896 148 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 IGHV4-59P01825 116 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 IGKV1-16P04430 117 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 SNRNP70P08621 437 aaKnown RBP20.37■□□□□ 0.85
SSBP3-202ENST00000357475 RAB25P57735 213 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 LRRC75BQ2VPJ9 315 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 ZDHHC16Q969W1 377 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 SCGB3A2Q96PL1 93 aa20.37■□□□□ 0.85
SSBP3-202ENST00000357475 FCGR3BO75015 233 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 VENTXO95231 258 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 IGKV1D-33P01593 117 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 IGKV1-33P01594 117 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 VSIG10L2P0DP72 767 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 SUPT4H1P63272 117 aaKnown RBP20.36■□□□□ 0.85
SSBP3-202ENST00000357475 SP6Q3SY56 376 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 CENPSQ8N2Z9 138 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 TP53RKQ96S44 253 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 TNFRSF19Q9NS68 423 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 SLC35D1Q9NTN3 355 aa20.36■□□□□ 0.85
SSBP3-202ENST00000357475 CRYM-AS1A6NIL9 109 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 FAM90A9PA6NNJ1 464 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 PTTG1O95997 202 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 F2RP25116 425 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 IER3P46695 156 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 HNF4GQ14541 408 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 ADTRPQ96IZ2 230 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 DUX5Q96PT3 197 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 PRR13Q9NZ81 148 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 NUBP2Q9Y5Y2 271 aa20.35■□□□□ 0.85
SSBP3-202ENST00000357475 H7C2Y5 167 aa20.34■□□□□ 0.85
SSBP3-202ENST00000357475 HOXA3O43365 443 aaPredicted RBP20.34■□□□□ 0.85
SSBP3-202ENST00000357475 LY6EQ16553 131 aa20.34■□□□□ 0.85
SSBP3-202ENST00000357475 CCBE1Q6UXH8 406 aaPredicted RBP20.34■□□□□ 0.85
SSBP3-202ENST00000357475 SLC25A42Q86VD7 318 aa20.34■□□□□ 0.85
SSBP3-202ENST00000357475 CCDC71LQ8N9Z2 235 aa20.34■□□□□ 0.85
SSBP3-202ENST00000357475 NAA60Q9H7X0 242 aa20.34■□□□□ 0.85
SSBP3-202ENST00000357475 WASHC3Q9Y3C0 194 aa20.34■□□□□ 0.85
SSBP3-202ENST00000357475 PEX14O75381 377 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 H2AFB2P0C5Z0 115 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 FAM157CP0CG43 387 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 CD1BP29016 333 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 DYNLT3P51808 116 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 CATR1Q13166 79 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 RGS21Q2M5E4 152 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 ZNF585BQ52M93 769 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 SPAG16Q8N0X2 631 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 ZFAND2BQ8WV99 257 aa20.33■□□□□ 0.85
SSBP3-202ENST00000357475 TEX13DA0A0J9YY54 714 aaPredicted RBP20.32■□□□□ 0.84
SSBP3-202ENST00000357475 C3orf85A0A1B0GTC6 90 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 APOA2P02652 100 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 S100GP29377 79 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 BRS3P32247 399 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 ARHGDIBP52566 201 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 PPP1R1AQ13522 171 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 HES1Q14469 280 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 TMEM219Q86XT9 240 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 EAF1Q96JC9 268 aaPredicted RBP20.32■□□□□ 0.84
SSBP3-202ENST00000357475 ESM1Q9NQ30 184 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 NIPBLQ6KC79 2804 aaeCLIP20.32■□□□□ 0.84
SSBP3-202ENST00000357475 CRYZL1O95825 349 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 OR5AC1P0C628 307 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms