RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 VKORC1L1Q8N0U8 176 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 UXS1Q8NBZ7 420 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 BEND2Q8NDZ0 799 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 TERB2Q8NHR7 220 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 RTN4IP1Q8WWV3 396 aaPredicted RBP3.23□□□□□ -1.89
LIG4-201ENST00000356922 S100ZQ8WXG8 99 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 MOB3AQ96BX8 217 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 DMRTB1Q96MA1 342 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 S1PR3Q99500 378 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 NBEAL1Q6ZS30 2694 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 IGHV1-3A0A0C4DH29 117 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 LINC01548A6NM66 108 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 DISC1C4P0D8 188 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 J3QLI3 93 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 CRLF1O75462 422 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 AMY1AP04745 511 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 CTXN2P0C2S0 81 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 VSIG10L2P0DP72 767 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 HTR1DP28221 377 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 TAS2R46P59540 309 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 TAS2R19P59542 299 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 MRPS10P82664 201 aaKnown RBP3.23□□□□□ -1.89
LIG4-201ENST00000356922 ZNF846Q147U1 533 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 IZUMO4Q1ZYL8 232 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 MRGPRG-AS1Q2M3A8 158 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 TPTE2P1Q5T6R2 138 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 ZNF833PQ6ZTB9 187 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 LINC00311Q8N616 119 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 SIGLECL1Q8N7X8 197 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 OR10A7Q8NGE5 316 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 ZNF418Q8TF45 676 aaPredicted RBP3.23□□□□□ -1.89
LIG4-201ENST00000356922 EDARADDQ8WWZ3 215 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 DDB2Q92466 427 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 DPM3Q9P2X0 92 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 GPR132Q9UNW8 380 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 WNK1Q9H4A3 2382 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 A0A0B4J293 547 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 TEX13DA0A0J9YY54 714 aaPredicted RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 NCBP2LA6PVI3 153 aaKnown RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 LYRM1O43325 122 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 HOXA3O43365 443 aaPredicted RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 CHST1O43916 411 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 PGLYRP1O75594 196 aaPredicted RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 VENTXO95231 258 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 IFNA2P01563 188 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 IGKV1-39P01597 117 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 IGKV1D-39P04432 117 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 CSF1P09603 554 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 AKAIN1P0CW23 69 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 RPA2P15927 270 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 SLC6A1P30531 599 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 DUTP33316 252 aaKnown RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 ZNF137PP52743 207 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 RELBQ01201 579 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 LY6EQ16553 131 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 ZNF585BQ52M93 769 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 C11orf88Q6PI97 169 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 TMED4Q7Z7H5 227 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 SLC51BQ86UW2 128 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 FAM219AQ8IW50 185 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 CMTM1Q8IZ96 169 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 CENPSQ8N2Z9 138 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 TP53RKQ96S44 253 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 NABP2Q9BQ15 211 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 CHIAQ9BZP6 476 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 PLSCR3Q9NRY6 295 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 SCP2D1Q9UJQ7 156 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 AMMECR1Q9Y4X0 333 aaPredicted RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 POM121CA8CG34 1229 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 FCN1O00602 326 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 ACTL6BO94805 426 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 MYOD1P15172 320 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 ANXA7P20073 488 aaKnown RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 IER3P46695 156 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 LUMP51884 338 aaPredicted RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 UBE2MP61081 183 aaKnown RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 BLCAPP62952 87 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 PJVKQ0ZLH3 352 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 ZDHHC22Q8N966 263 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 OR51H1Q8NH63 302 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 LHFPL5Q8TAF8 219 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 ENKURQ8TC29 256 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 WDR89Q96FK6 387 aaPredicted RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 SSX3Q99909 188 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 NEURL2Q9BR09 285 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 SLC5A7Q9GZV3 580 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 MEGF9Q9H1U4 602 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 TPSG1Q9NRR2 321 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 C14orf166Q9Y224 244 aaKnown RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 TRAV6A0A075B6T7 132 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 DBX1A6NMT0 343 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 FAM90A9PA6NNJ1 464 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 E7EUB6 86 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 H3BUX3 64 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 M0R1X1 148 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 RAB29O14966 203 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 FBP1P09467 338 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 BRS3P32247 399 aa3.22□□□□□ -1.89
LIG4-201ENST00000356922 SSBP2P81877 361 aaPredicted RBP3.22□□□□□ -1.89
LIG4-201ENST00000356922 HABP2Q14520 560 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms