RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PET117Q6UWS5 81 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 COL9A1P20849 921 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 RBM11P57052 281 aaKnown RBP14.99□□□□□ -0.01
COL27A1-201ENST00000356083 JKAMPQ9P055 326 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 OR10J1P30954 320 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 GAB4Q2WGN9 574 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 CFAP161Q6P656 301 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 PRSS54Q6PEW0 395 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 ITLN1Q8WWA0 313 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 TMEM50BP56557 158 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 SNAI3Q3KNW1 292 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 FBXW9Q5XUX1 488 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 NPBWR2P48146 333 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 TRGV3P03979 118 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 RNASEH2CQ8TDP1 164 aaKnown RBP14.99□□□□□ -0.01
COL27A1-201ENST00000356083 USP54Q70EL1 1684 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 ZNF688P0C7X2 276 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 C1orf174Q8IYL3 243 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 LINC01560Q8TB33 94 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 ALKBH7Q9BT30 221 aaPredicted RBP14.98□□□□□ -0.01
COL27A1-201ENST00000356083 COL25A1Q9BXS0 654 aaPredicted RBP14.98□□□□□ -0.01
COL27A1-201ENST00000356083 PCOLCEQ15113 449 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 INO80CQ6PI98 192 aaPredicted RBP14.98□□□□□ -0.01
COL27A1-201ENST00000356083 CTSDP07339 412 aaPredicted RBP14.98□□□□□ -0.01
COL27A1-201ENST00000356083 ERGP11308 486 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 IBA57Q5T440 356 aaKnown RBP14.98□□□□□ -0.01
COL27A1-201ENST00000356083 TMEM136Q6ZRR5 245 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 ZNF826PQ6ZT77 177 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 GMPPAQ96IJ6 420 aaPredicted RBP14.98□□□□□ -0.01
COL27A1-201ENST00000356083 TLNRD1Q9H1K6 362 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 SLC52A3Q9NQ40 469 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 MRPL16Q9NX20 251 aaKnown RBP14.98□□□□□ -0.01
COL27A1-201ENST00000356083 PPIAL4CA0A0B4J2A2 164 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 PPIAL4GP0DN37 164 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 SSC5DA1L4H1 1573 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 ZP3P21754 424 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 NPPCP23582 126 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 PQLC2Q6ZP29 291 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 TCRBV16S1A1N1A0A5B0 115 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 EIF3GO75821 320 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL27A1-201ENST00000356083 STHQ8IWL8 128 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 HSPB9Q9BQS6 159 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 OR2H1Q9GZK4 316 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 NPVFQ9HCQ7 196 aa14.98□□□□□ -0.01
COL27A1-201ENST00000356083 TMEM70Q9BUB7 260 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 RBKSQ9H477 322 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 MTFP1Q9UDX5 166 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 TMEFF2Q9UIK5 374 aaPredicted RBP14.97□□□□□ -0.01
COL27A1-201ENST00000356083 HRKO00198 91 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 CNTFRP26992 372 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 ALG14Q96F25 216 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 LRRC37A3O60309 1634 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 IGHV3OR16-8A0A075B7F1 116 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 PLPP2O43688 288 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 NDUFB4O95168 129 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 WNT10AQ9GZT5 417 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 TNFRSF12AQ9NP84 129 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 CD69Q07108 199 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 RNASE4P34096 147 aaKnown RBP14.97□□□□□ -0.01
COL27A1-201ENST00000356083 YIPF6Q96EC8 236 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 GPHA2Q96T91 129 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 ANGPTL4Q9BY76 406 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 IL20Q9NYY1 176 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 MOSPD3O75425 235 aa14.97□□□□□ -0.01
COL27A1-201ENST00000356083 TTTY12Q9BZ98 90 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 CYB5R1Q9UHQ9 305 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 MAST2Q6P0Q8 1798 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 HBZP02008 142 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 PNRC1Q12796 327 aaPredicted RBP14.96□□□□□ -0.01
COL27A1-201ENST00000356083 TRAV8-6A0A0B4J262 113 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 C3orf36Q3SXR2 165 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 SAPCD1Q5SSQ6 148 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 EEF1AKMT3Q96AZ1 226 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 TRBV20OR9-2A0A075B6H5 130 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 LINC00862A6NCI5 91 aa14.96□□□□□ -0.01
COL27A1-201ENST00000356083 FTH1P19P0C7X4 201 aa14.96□□□□□ -0.02
COL27A1-201ENST00000356083 RND2P52198 227 aa14.96□□□□□ -0.02
COL27A1-201ENST00000356083 UCP2P55851 309 aa14.96□□□□□ -0.02
COL27A1-201ENST00000356083 BIVMQ86UB2 503 aa14.96□□□□□ -0.02
COL27A1-201ENST00000356083 FLRT3Q9NZU0 649 aa14.96□□□□□ -0.02
COL27A1-201ENST00000356083 SELENOKQ9Y6D0 94 aa14.96□□□□□ -0.02
COL27A1-201ENST00000356083 LINC01555Q8NAE3 123 aa14.96□□□□□ -0.02
COL27A1-201ENST00000356083 NFAM1Q8NET5 270 aaPredicted RBP14.96□□□□□ -0.02
COL27A1-201ENST00000356083 KDM3BQ7LBC6 1761 aa14.96□□□□□ -0.02
COL27A1-201ENST00000356083 GTSCR1Q86UQ5 136 aa14.95□□□□□ -0.02
COL27A1-201ENST00000356083 TGIF1Q15583 401 aa14.95□□□□□ -0.02
COL27A1-201ENST00000356083 DCAF10Q5QP82 559 aa14.95□□□□□ -0.02
COL27A1-201ENST00000356083 RNF133Q8WVZ7 376 aa14.95□□□□□ -0.02
COL27A1-201ENST00000356083 TMEM210A6NLX4 147 aa14.95□□□□□ -0.02
COL27A1-201ENST00000356083 PRB3Q04118 309 aaPredicted RBP14.95□□□□□ -0.02
COL27A1-201ENST00000356083 IFT22Q9H7X7 185 aa14.95□□□□□ -0.02
COL27A1-201ENST00000356083 PCSK4Q6UW60 755 aa14.95□□□□□ -0.02
COL27A1-201ENST00000356083 SRD5A1P18405 259 aa14.95□□□□□ -0.02
COL27A1-201ENST00000356083 RAB33BQ9H082 229 aa14.95□□□□□ -0.02
COL27A1-201ENST00000356083 RPL8P62917 257 aaKnown RBP14.95□□□□□ -0.02
COL27A1-201ENST00000356083 CRPP02741 224 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 TDGF1P3P51864 188 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 RAE1P78406 368 aaKnown RBP14.94□□□□□ -0.02
COL27A1-201ENST00000356083 SIGLEC14Q08ET2 396 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 DDX60LQ5H9U9 1706 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 326.6 ms