RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SIGLECL1Q8N7X8 197 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 CPEB3Q8NE35 698 aaKnown RBP15.93■□□□□ 0.14
PRPF39-201ENST00000355765 Q8NFD4 153 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 CADM4Q8NFZ8 388 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 STRADBQ9C0K7 418 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 USF3Q68DE3 2245 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 TRAV24A0A0B4J272 114 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 FCN1O00602 326 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 TMPRSS2O15393 492 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 ZG16O60844 167 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 CCL3P10147 92 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 IGFBP4P22692 258 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 ZXDAP98168 799 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 KRTCAP3Q53RY4 240 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 C9orf135Q5VTT2 229 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 LEMD1Q68G75 181 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 TECTBQ96PL2 329 aa15.93■□□□□ 0.14
PRPF39-201ENST00000355765 ZIC3O60481 467 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 SPINK4O60575 86 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 RAMP3O60896 148 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 SERPINA7P05543 415 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 CEACAM8P31997 349 aaPredicted RBP15.92■□□□□ 0.14
PRPF39-201ENST00000355765 SUMO1P63165 101 aaKnown RBP15.92■□□□□ 0.14
PRPF39-201ENST00000355765 ZNF816Q0VGE8 651 aaPredicted RBP15.92■□□□□ 0.14
PRPF39-201ENST00000355765 TIPARPQ7Z3E1 657 aaKnown RBP15.92■□□□□ 0.14
PRPF39-201ENST00000355765 OR10P1Q8NGE3 313 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 OR10G8Q8NGN5 311 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 ZNF391Q9UJN7 358 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 PDE6DO43924 150 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 EDDM3BP56851 147 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 KRTAP27-1Q3LI81 207 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 AAED1Q7RTV5 226 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 MCEMP1Q8IX19 187 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 Q8N976 141 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 OR4B1Q8NGF8 309 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 OR5A2Q8NGI9 324 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 OCC1Q8TAD7 63 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 LRFN3Q9BTN0 628 aa15.92■□□□□ 0.14
PRPF39-201ENST00000355765 LIN7CQ9NUP9 197 aaKnown RBP15.92■□□□□ 0.14
PRPF39-201ENST00000355765 SCO2A0A1W2PP80 73 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 PMCHP20382 165 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 RNF151Q2KHN1 245 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 UNQ5815/PRO19632Q6UWF5 114 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 AKIRIN1Q9H9L7 192 aaPredicted RBP15.91■□□□□ 0.14
PRPF39-201ENST00000355765 IGHEP01854 428 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 COL8A2P25067 703 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 FKBP2P26885 142 aaKnown RBP15.91■□□□□ 0.14
PRPF39-201ENST00000355765 TIMP3P35625 211 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 HNRNPA3P51991 378 aaKnown RBP15.91■□□□□ 0.14
PRPF39-201ENST00000355765 KIAA1644Q3SXP7 199 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 SAPCD1Q5SSQ6 148 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 APOBEC3DQ96AK3 386 aaPredicted RBP15.91■□□□□ 0.14
PRPF39-201ENST00000355765 STARD4Q96DR4 205 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 LAMTOR2Q9Y2Q5 125 aa15.91■□□□□ 0.14
PRPF39-201ENST00000355765 TBL2Q9Y4P3 447 aaKnown RBP15.91■□□□□ 0.14
PRPF39-201ENST00000355765 SNURFLB1AK76 121 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 DKK1O94907 266 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 HINT1P49773 126 aaPredicted RBP15.9■□□□□ 0.14
PRPF39-201ENST00000355765 ATOH7Q8N100 152 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 WNT10AQ9GZT5 417 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 ZNF552Q9H707 407 aaPredicted RBP15.9■□□□□ 0.14
PRPF39-201ENST00000355765 FRYLO94915 3013 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 IGLV3-12A0A075B6K2 115 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 HYPMO75409 117 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 TGFBR3Q03167 851 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 DRAM1Q8N682 238 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 AGBL5Q8NDL9 886 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 ZNF703Q9H7S9 590 aaPredicted RBP15.9■□□□□ 0.14
PRPF39-201ENST00000355765 GNB4Q9HAV0 340 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 ZNF586Q9NXT0 402 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 SLC45A2Q9UMX9 530 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 FRYQ5TBA9 3013 aa15.9■□□□□ 0.14
PRPF39-201ENST00000355765 PMS2P5A8MQ11 134 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 ESDP10768 282 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 CTRLP40313 264 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 C1orf174Q8IYL3 243 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 CPT1CQ8TCG5 803 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 A0A1W2PR77 199 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 RBMXL2O75526 392 aaKnown RBP15.89■□□□□ 0.13
PRPF39-201ENST00000355765 EPHA8P29322 1005 aaPredicted RBP15.89■□□□□ 0.13
PRPF39-201ENST00000355765 AMTP48728 403 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 ALKBH2Q6NS38 261 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 WDR74Q6RFH5 385 aaPredicted RBP15.89■□□□□ 0.13
PRPF39-201ENST00000355765 APH1AQ96BI3 265 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 DLL3Q9NYJ7 618 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 PIGBOS1A0A0B4J2F0 54 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 NKX6-3A6NJ46 265 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 LIFP15018 202 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 PSG7Q13046 419 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 FAM53AQ6NSI3 398 aaPredicted RBP15.89■□□□□ 0.13
PRPF39-201ENST00000355765 RNF2Q99496 336 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 KCNIP2Q9NS61 270 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 HSPB7Q9UBY9 170 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 UQCR10Q9UDW1 63 aa15.89■□□□□ 0.13
PRPF39-201ENST00000355765 FREM1Q5H8C1 2179 aa15.88■□□□□ 0.13
PRPF39-201ENST00000355765 ODAMA1E959 279 aa15.88■□□□□ 0.13
PRPF39-201ENST00000355765 SCRG1O75711 98 aa15.88■□□□□ 0.13
PRPF39-201ENST00000355765 GPX1P07203 203 aa15.88■□□□□ 0.13
PRPF39-201ENST00000355765 YRDCQ86U90 279 aaKnown RBP15.88■□□□□ 0.13
PRPF39-201ENST00000355765 ZNF808Q8N4W9 903 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms