RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GPR132Q9UNW8 380 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 SIRT4Q9Y6E7 314 aaPredicted RBP12.84□□□□□ -0.35
LMX1B-201ENST00000355497 TRBV9A0A0B4J1U6 114 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 GDF9O60383 454 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 GPX1P07203 203 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 IL9P15248 144 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 IL11P20809 199 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 AGAP20933 346 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 TSPOP30536 169 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 IFNL4K9M1U5 179 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 C8orf88P0DMB2 117 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 DDA1Q9BW61 102 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 LINC00470Q9BZP3 86 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 DXOO77932 396 aaKnown RBP12.83□□□□□ -0.36
LMX1B-201ENST00000355497 IGKV1D-16P01601 117 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 C1QAP02745 245 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 NMBP08949 121 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 HOXD4P09016 255 aaPredicted RBP12.83□□□□□ -0.36
LMX1B-201ENST00000355497 PEBP1P30086 187 aaKnown RBP12.83□□□□□ -0.36
LMX1B-201ENST00000355497 ITLN1Q8WWA0 313 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 RARRES2Q99969 163 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 KLK15Q9H2R5 256 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 FAM90A26D6RGX4 464 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 NPIPB8E9PQR5 432 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 NPFFO15130 113 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 ZNF660Q6AZW8 331 aaPredicted RBP12.83□□□□□ -0.36
LMX1B-201ENST00000355497 A0A0J9YW62 118 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 TSPAN2O60636 221 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 C1QL1O75973 258 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 CFDP00746 253 aaPredicted RBP12.83□□□□□ -0.36
LMX1B-201ENST00000355497 MEF2CQ06413 473 aaPredicted RBP12.83□□□□□ -0.36
LMX1B-201ENST00000355497 SPSB4Q96A44 273 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 KCNE5Q9UJ90 142 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 ZDHHC8Q9ULC8 765 aa12.83□□□□□ -0.36
LMX1B-201ENST00000355497 CXorf65A6NEN9 183 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 H0YL77 283 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 CD160O95971 181 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 CXorf66Q5JRM2 361 aaPredicted RBP12.82□□□□□ -0.36
LMX1B-201ENST00000355497 ALKBH7Q9BT30 221 aaPredicted RBP12.82□□□□□ -0.36
LMX1B-201ENST00000355497 TRBV5-5A0A0J9YX44 114 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 P2RY4P51582 365 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 FGFRL1Q8N441 504 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 TMEM52Q8NDY8 209 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 ZNF418Q8TF45 676 aaPredicted RBP12.82□□□□□ -0.36
LMX1B-201ENST00000355497 KIR2DL4Q99706 377 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 PKD1L3Q7Z443 1732 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 P2RY6Q15077 328 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 AQP10Q96PS8 301 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 PPP1R3EQ9H7J1 279 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 NGFRP08138 427 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 MBNL2Q5VZF2 373 aaKnown RBP12.82□□□□□ -0.36
LMX1B-201ENST00000355497 PCSK4Q6UW60 755 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 FAM206AQ9NX38 181 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 FOXS1O43638 330 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 PCP4P48539 62 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 GZMMP51124 257 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 PAPPA-AS1Q5QFB9 102 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 FAM214BQ7L5A3 538 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 DUSP15Q9H1R2 295 aaPredicted RBP12.82□□□□□ -0.36
LMX1B-201ENST00000355497 CALYQ9NYX4 217 aa12.82□□□□□ -0.36
LMX1B-201ENST00000355497 SPINT1O43278 529 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 COX6B1P14854 86 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 ARF6P62330 175 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 UNC119Q13432 240 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 HIST1H1AQ02539 215 aaPredicted RBP12.81□□□□□ -0.36
LMX1B-201ENST00000355497 FAM74A4Q5TZK3 123 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 C10orf111Q8N326 155 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 AQP3Q92482 292 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 FOXC2Q99958 501 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 SPAARA0A1B0GVQ0 90 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 MRPL32Q9BYC8 188 aaKnown RBP12.81□□□□□ -0.36
LMX1B-201ENST00000355497 CENPVL1A0A0U1RR11 272 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 CRYBB3P26998 211 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 PIMREGQ9BSJ6 248 aa12.81□□□□□ -0.36
LMX1B-201ENST00000355497 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
LMX1B-201ENST00000355497 TMEM229AB2RXF0 380 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 TMEM262E9PQX1 116 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 HLA-DQB1P01920 261 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 HSPE1P61604 102 aaKnown RBP12.8□□□□□ -0.36
LMX1B-201ENST00000355497 RELQ04864 619 aaPredicted RBP12.8□□□□□ -0.36
LMX1B-201ENST00000355497 IGHV1-45A0A0A0MS14 117 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 TNFRSF9Q07011 255 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 C19orf24Q9BVV8 132 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 C1QTNF9BB2RNN3 333 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 SIGLEC5O15389 551 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 UCNP55089 124 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 RPS11P62280 158 aaKnown RBP eCLIP12.8□□□□□ -0.36
LMX1B-201ENST00000355497 SIGLEC14Q08ET2 396 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 OR51G1Q8NGK1 321 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 PKIBQ9C010 78 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 NDUFA2O43678 99 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 PMS2CLQ68D20 193 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 THY1P04216 161 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 RND3P61587 244 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 SFRP2Q96HF1 295 aa12.8□□□□□ -0.36
LMX1B-201ENST00000355497 SUMO2P61956 95 aaKnown RBP12.79□□□□□ -0.36
LMX1B-201ENST00000355497 ZNF826PQ6ZT77 177 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 CBLN4Q9NTU7 201 aa12.79□□□□□ -0.36
LMX1B-201ENST00000355497 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
LMX1B-201ENST00000355497 RREB1Q92766 1687 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms