RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 FAM78AQ5JUQ0 283 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ZNF114Q8NC26 417 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 MAFAQ8NHW3 353 aaPredicted RBP7.02□□□□□ -1.29
SCN8A-201ENST00000354534 SLIRPQ9GZT3 109 aaKnown RBP7.02□□□□□ -1.29
SCN8A-201ENST00000354534 SMDT1Q9H4I9 107 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 PLSCR2Q9NRY7 297 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 IGHV3OR15-7A0A075B7D8 119 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 IGKV6D-21A0A0A0MT36 114 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.02□□□□□ -1.29
SCN8A-201ENST00000354534 SYNGR1O43759 233 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 QTRT1Q9BXR0 403 aaKnown RBP7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ZNF257Q9Y2Q1 563 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 TRBV9A0A0B4J1U6 114 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ZGLP1P0C6A0 271 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 NPC2P61916 151 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 GAGE13Q4V321 117 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 PATE1Q8WXA2 126 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 A0A0U1RQV5 110 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 GCM2O75603 506 aaPredicted RBP7.02□□□□□ -1.29
SCN8A-201ENST00000354534 TOMM40O96008 361 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 FGF5P12034 268 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ATXN8Q156A1 80 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ACSF3Q4G176 576 aaPredicted RBP7.02□□□□□ -1.29
SCN8A-201ENST00000354534 RNF182Q8N6D2 247 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 GGTLC1Q9BX51 225 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 TRAV41A0A0B4J266 112 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ASAH2BP0C7U1 165 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 PRB4P10163 310 aaPredicted RBP7.02□□□□□ -1.29
SCN8A-201ENST00000354534 PRR7Q8TB68 274 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ATP5LO75964 103 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 PF4V1P10720 104 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 SRD5A2P31213 254 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ZNF585BQ52M93 769 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 C1orf185Q5T7R7 199 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ZBP1Q9H171 429 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 CHODLQ9H9P2 273 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 MMP25Q9NPA2 562 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 EPDR1Q9UM22 224 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ACACAQ13085 2346 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 DCAF10Q5QP82 559 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 OR13H1Q8NG92 308 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 OR52M1Q8NGK5 317 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 GTF3C1Q12789 2109 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 TDRD15B5MCY1 1934 aaKnown RBP7.01□□□□□ -1.29
SCN8A-201ENST00000354534 K7ESM1 405 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 PPYP01298 95 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 PSG9Q00887 426 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 MMDQ15546 238 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 ZNF124Q15973 351 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 ABHD1Q96SE0 405 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 H0YIG0 161 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 TCTN3Q6NUS6 607 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 WDFY2Q96P53 400 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 CCL28Q9NRJ3 127 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 SSC5DA1L4H1 1573 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 KBTBD11-OT1A0A1B0GTJ5 212 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 NCR2O95944 276 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 SYNGR3O43761 229 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 ISG15P05161 165 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 SERF2P84101 59 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 BCL2L10Q9HD36 194 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 CREBBPQ92793 2442 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 GPR6P46095 362 aaPredicted RBP7.01□□□□□ -1.29
SCN8A-201ENST00000354534 KIRREL2Q6UWL6 708 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 SYT11Q9BT88 431 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 HCSTQ9UBK5 93 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 SOCS1O15524 211 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 HPRT1P00492 218 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 ZNF32P17041 273 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 MRPL24Q96A35 216 aaKnown RBP7.01□□□□□ -1.29
SCN8A-201ENST00000354534 CEACAM4O75871 244 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 HBDP02042 147 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 APOHP02749 345 aaPredicted RBP7.01□□□□□ -1.29
SCN8A-201ENST00000354534 PPICP45877 212 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 FOXF1Q12946 379 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 TUBA4BQ9H853 241 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 PLA2G3Q9NZ20 509 aa7.01□□□□□ -1.29
SCN8A-201ENST00000354534 CBLN1P23435 193 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 GPR183P32249 361 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 SAMD5Q5TGI4 173 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 METRNLQ641Q3 311 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 PTCRAQ6ISU1 281 aaPredicted RBP7□□□□□ -1.29
SCN8A-201ENST00000354534 THSD4Q6ZMP0 1018 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 GSN-AS1Q9NRJ2 163 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 H0Y8X5 98 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 NKX2-2O95096 273 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 MPZL1O95297 269 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 LINC00869P0C866 280 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 RBMY1FQ15415 496 aaKnown RBP7□□□□□ -1.29
SCN8A-201ENST00000354534 PMS2CLQ68D20 193 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 ZNF793Q6ZN11 406 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 CCL26Q9Y258 94 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 VGLL1Q99990 258 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 M0R2P5 195 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 M0R381 172 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 HYAL3O43820 417 aaPredicted RBP7□□□□□ -1.29
SCN8A-201ENST00000354534 ESDP10768 282 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 SLC25A1P53007 311 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 FUT5Q11128 374 aa7□□□□□ -1.29
SCN8A-201ENST00000354534 GGTLC2Q14390 218 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms