RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 LINC00205P59089 165 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 SSBP2P81877 361 aaPredicted RBP12.21□□□□□ -0.45
PDGFA-201ENST00000354513 RAB11BQ15907 218 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 CASC10Q5T4H9 136 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 NR2C2APQ86WQ0 139 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 IL1F10Q8WWZ1 152 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 ARPC1AQ92747 370 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 ISOC1Q96CN7 298 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 BCL7BQ9BQE9 202 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 PIPOXQ9P0Z9 390 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 KIAA1456Q9P272 454 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 A3GALT2U3KPV4 340 aa12.21□□□□□ -0.45
PDGFA-201ENST00000354513 TRBV6-6A0A0A6YYG2 114 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 DPPA5A6NC42 116 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 OR5H14A6NHG9 310 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 NOTOA8MTQ0 251 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 SLC17A2O00624 439 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 SLC22A1O15245 554 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 RPS19P39019 145 aaKnown RBP12.2□□□□□ -0.46
PDGFA-201ENST00000354513 P2RY14Q15391 338 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 HES5Q5TA89 166 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 HAPLN4Q86UW8 402 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 OR5AN1Q8NGI8 311 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 OR6M1Q8NGM8 313 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 MUC7Q8TAX7 377 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 NEDD4LQ96PU5 975 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 LPAR5Q9H1C0 372 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 DCSTAMPQ9H295 470 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 AK3Q9UIJ7 227 aa12.2□□□□□ -0.46
PDGFA-201ENST00000354513 SMIM31A0A1B0GVY4 71 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 IFITM5A6NNB3 132 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 H3BMQ9 156 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 ITGB1BP1O14713 200 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 RAB29O14966 203 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 SOCS1O15524 211 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 IGHV3-11P01762 117 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 HLA-DRB3P79483 266 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 SPCS2Q15005 226 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 SFXN4Q6P4A7 337 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 TCTEX1D1Q8N7M0 179 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 C11orf54Q9H0W9 315 aaPredicted RBP12.19□□□□□ -0.46
PDGFA-201ENST00000354513 RBM38Q9H0Z9 239 aaKnown RBP12.19□□□□□ -0.46
PDGFA-201ENST00000354513 NDUFA13Q9P0J0 144 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 ABRACLQ9P1F3 81 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 RSL24D1Q9UHA3 163 aaKnown RBP12.19□□□□□ -0.46
PDGFA-201ENST00000354513 STEAP1Q9UHE8 339 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 WASHC3Q9Y3C0 194 aa12.19□□□□□ -0.46
PDGFA-201ENST00000354513 IGKV1-6A0A0C4DH72 117 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 ARPC1BO15143 372 aaKnown RBP12.18□□□□□ -0.46
PDGFA-201ENST00000354513 CA2P00918 260 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 IGKV1-16P04430 117 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 RANBP1P43487 201 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 CLDN12P56749 244 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 PSG5Q15238 335 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 MOB1BQ7L9L4 216 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 PPP1R27Q86WC6 154 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 ZNF383Q8NA42 475 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 SETD6Q8TBK2 473 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 RHOVQ96L33 236 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 GAR1Q9NY12 217 aaKnown RBP12.18□□□□□ -0.46
PDGFA-201ENST00000354513 DAPK2Q9UIK4 370 aa12.18□□□□□ -0.46
PDGFA-201ENST00000354513 EPPK1P58107 5090 aaKnown RBP12.18□□□□□ -0.46
PDGFA-201ENST00000354513 BPNT1O95861 308 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 SCTP09683 121 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 TMEM50BP56557 158 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 AKIRIN2Q53H80 203 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 IDNKQ5T6J7 187 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 UNQ5815/PRO19632Q6UWF5 114 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 Q8N1Y9 231 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 FAM89BQ8N5H3 189 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 DRAXINQ8NBI3 349 aaPredicted RBP12.17□□□□□ -0.46
PDGFA-201ENST00000354513 LFNGQ8NES3 379 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 KCNG3Q8TAE7 436 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 SLC25A46Q96AG3 418 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 FAM3DQ96BQ1 224 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 MS4A10Q96PG2 267 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 CLCC1Q96S66 551 aa12.17□□□□□ -0.46
PDGFA-201ENST00000354513 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
PDGFA-201ENST00000354513 METTL1Q9UBP6 276 aaKnown RBP12.17□□□□□ -0.46
PDGFA-201ENST00000354513 A0A0B4J203 849 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 ZNF701M0R085 212 aaPredicted RBP12.16□□□□□ -0.46
PDGFA-201ENST00000354513 RBBP9O75884 186 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 HSPB1P04792 205 aaKnown RBP12.16□□□□□ -0.46
PDGFA-201ENST00000354513 OR8U9P0C7N5 309 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 ARSBP15848 533 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 MC5RP33032 325 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 TPPP2P59282 170 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 PLGLAQ15195 96 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 ACTBL2Q562R1 376 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 CROCCP3Q8IVE0 287 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 OR6Q1Q8NGQ2 317 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 ABHD5Q8WTS1 349 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 PTX4Q96A99 478 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 C5orf30Q96GV9 206 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 TM2D3Q9BRN9 247 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 Q9N2K0 584 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 RNF150Q9ULK6 438 aa12.16□□□□□ -0.46
PDGFA-201ENST00000354513 H7C2Y5 167 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 IGLV1-51P01701 117 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 GSTP1P09211 210 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms