RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZCCHC24Q8N2G6 241 aaKnown RBP5.71□□□□□ -1.5
TRIM55-203ENST00000350034 STPG2Q8N412 459 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.71□□□□□ -1.5
TRIM55-203ENST00000350034 OR1S2Q8NGQ3 325 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 CT45A3Q8NHU0 189 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 LYPD6BQ8NI32 183 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 CD300LFQ8TDQ1 290 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 TCTEX1D2Q8WW35 142 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 DDB2Q92466 427 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 MARC2Q969Z3 335 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 LRRC46Q96FV0 321 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF251Q9BRH9 671 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 SMIM3Q9BZL3 60 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 MAGT1Q9H0U3 335 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 DYNLRB1Q9NP97 96 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 IDI2-AS1Q9NZ38 188 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 GNG12Q9UBI6 72 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 LPAR3Q9UBY5 353 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 RPUSD1Q9UJJ7 312 aaKnown RBP5.71□□□□□ -1.5
TRIM55-203ENST00000350034 LAMP3Q9UQV4 416 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 PPIAL4AQ9Y536 164 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 LINC00312Q9Y6C7 94 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 WSB1Q9Y6I7 421 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 DOPEY2Q9Y3R5 2298 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 hADV38S2A0JD32 116 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 MEX3AA1L020 520 aaKnown RBP5.7□□□□□ -1.5
TRIM55-203ENST00000350034 FAM90A9PA6NNJ1 464 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 KRBOX1C9JBD0 128 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 WRBO00258 174 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 SLC31A2O15432 143 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 SYNGR2O43760 224 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 MMP23AO75900 390 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 S1PR2O95136 353 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 DANCRP0C864 163 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 GPR12P47775 334 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 CAV2P51636 162 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 ARHGDIBP52566 201 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 AKR1C2P52895 323 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 RPL23AP62750 156 aaKnown RBP5.7□□□□□ -1.5
TRIM55-203ENST00000350034 BLOC1S1P78537 153 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 LY6DQ14210 128 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 LTC4SQ16873 150 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF672Q499Z4 452 aaPredicted RBP5.7□□□□□ -1.5
TRIM55-203ENST00000350034 UQCC3Q6UW78 93 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 BTNL8Q6UX41 500 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 BTNL3Q6UXE8 466 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 C1orf229Q6ZS94 237 aaPredicted RBP5.7□□□□□ -1.5
TRIM55-203ENST00000350034 RNASE11Q8TAA1 199 aaKnown RBP5.7□□□□□ -1.5
TRIM55-203ENST00000350034 TSNAXQ99598 290 aaKnown RBP5.7□□□□□ -1.5
TRIM55-203ENST00000350034 ABHD14AQ9BUJ0 271 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 KCNJ16Q9NPI9 418 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 PARP11Q9NR21 331 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 CISD1Q9NZ45 108 aaKnown RBP5.7□□□□□ -1.5
TRIM55-203ENST00000350034 SLC25A10Q9UBX3 287 aaPredicted RBP5.7□□□□□ -1.5
TRIM55-203ENST00000350034 HSPB7Q9UBY9 170 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 POLEQ07864 2286 aa5.7□□□□□ -1.5
TRIM55-203ENST00000350034 IGHV1-69-2A0A0G2JMI3 117 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF705EA8MWA4 302 aaPredicted RBP5.69□□□□□ -1.5
TRIM55-203ENST00000350034 TEX46H3BTG2 121 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 M0R1X1 148 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 NDUFA2O43678 99 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 ZG16O60844 167 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 FBXO24O75426 580 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 MED6O75586 246 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 HPRT1P00492 218 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 OMGP23515 440 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 G6PCP35575 357 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 KIR2DS2P43631 304 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 SULT1A1P50225 295 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 PPOXP50336 477 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 RAB5CP51148 216 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 DYNLT3P51808 116 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 DLX6P56179 175 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 LINC00205P59089 165 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 UBE2KP61086 200 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 TNFRSF9Q07011 255 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF816Q0VGE8 651 aaPredicted RBP5.69□□□□□ -1.5
TRIM55-203ENST00000350034 PJVKQ0ZLH3 352 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF266Q14584 549 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF273Q14593 569 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 C4orf17Q53FE4 359 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 PDLIM3Q53GG5 364 aaPredicted RBP5.69□□□□□ -1.5
TRIM55-203ENST00000350034 RPL39P5Q59GN2 51 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 PXDC1Q5TGL8 231 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 TMEM200BQ69YZ2 307 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 LYPD2Q6UXB3 125 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 TMEM14EPQ6UXP3 125 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 IL34Q6ZMJ4 242 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 SLC25A48Q6ZT89 311 aaKnown RBP5.69□□□□□ -1.5
TRIM55-203ENST00000350034 HAPLN4Q86UW8 402 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 CCDC28AQ8IWP9 274 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 C8orf31Q8N9H6 132 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF596Q8TC21 504 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 CA5BP1Q8WTZ4 195 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 CCL17Q92583 94 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 ADTRPQ96IZ2 230 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 LINC00052Q96N35 136 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 MMP26Q9NRE1 261 aa5.69□□□□□ -1.5
TRIM55-203ENST00000350034 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.69□□□□□ -1.5
TRIM55-203ENST00000350034 C19orf12Q9NSK7 152 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms