RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ASXL3Q9C0F0 2248 aa8.73□□□□□ -1.01
CHRNA1-202ENST00000348749 IGHV2-26A0A0B4J1V2 119 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 ZIC3O60481 467 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 IGKV1-5P01602 117 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 TIMP3P35625 211 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 FOXL2P58012 376 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 PCOLCEQ15113 449 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 TRIP6Q15654 476 aaKnown RBP8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 RAET1LQ5VY80 246 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 PCSK4Q6UW60 755 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 UNQ5815/PRO19632Q6UWF5 114 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 LINC00596Q86U02 117 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 PNKDQ8N490 385 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 ZNF114Q8NC26 417 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 OR4C5Q8NGB2 326 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 OR10G8Q8NGN5 311 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 TXNDC17Q9BRA2 123 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 PRDM14Q9GZV8 571 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 IL36BQ9NZH7 164 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 OR2W1Q9Y3N9 320 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 CHTOPQ9Y3Y2 248 aaKnown RBP8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 TRBV6-6A0A0A6YYG2 114 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 IGHV1-69-2A0A0G2JMI3 117 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 TNFSF4P23510 183 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 TSPOP30536 169 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 RNF151Q2KHN1 245 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 OR10J3Q5JRS4 329 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 PLCXD3Q63HM9 321 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 ZNF324BQ6AW86 544 aaPredicted RBP8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 MYPOPQ86VE0 399 aaPredicted RBP8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 NUDT10Q8NFP7 164 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 OR51H1Q8NH63 302 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 IFI44Q8TCB0 444 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 CORO2AQ92828 525 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 LRFN3Q9BTN0 628 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 DUSP23Q9BVJ7 150 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 C1QTNF5Q9BXJ0 243 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 OR2H1Q9GZK4 316 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 NRN1Q9NPD7 142 aa8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 TBL2Q9Y4P3 447 aaKnown RBP8.72□□□□□ -1.01
CHRNA1-202ENST00000348749 F2Z2F3 143 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 TNFSF11O14788 317 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 WDR1O75083 606 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 NDUFB4O95168 129 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 ZNF32P17041 273 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 CDC34P49427 236 aaPredicted RBP8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 LGALS4P56470 323 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 RHOGP84095 191 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 ZNF90Q03938 601 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 PRAMEF20Q5VT98 475 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 TIPARPQ7Z3E1 657 aaKnown RBP8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 TDHQ8IZJ6 230 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 ZNF611Q8N823 705 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 RAB1CQ92928 201 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 KCNS1Q96KK3 526 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 TUBG2Q9NRH3 451 aa8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 MRPL27Q9P0M9 148 aaKnown RBP8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 MRPS17Q9Y2R5 130 aaKnown RBP8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 RANBP2P49792 3224 aaKnown RBP8.71□□□□□ -1.02
CHRNA1-202ENST00000348749 TNRC6BQ9UPQ9 1833 aaKnown RBP8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 A0A0J9YW62 118 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 SH2D1BO14796 132 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 PLA2G5P39877 138 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 ATP5G3P48201 142 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 SSR4P51571 173 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 PRRX1P54821 245 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 FGF12P61328 243 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 PSG4Q00888 419 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 VWC2Q2TAL6 325 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 HLA-DRB5Q30154 266 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 MCEMP1Q8IX19 187 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 OR1K1Q8NGR3 316 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 RDH5Q92781 318 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 IMMP1LQ96LU5 166 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 DERL1Q9BUN8 251 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 GNB1LQ9BYB4 327 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 GNB4Q9HAV0 340 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 PROK2Q9HC23 129 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 TRBV20OR9-2A0A075B6H5 130 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 IGHV1-45A0A0A0MS14 117 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 IGLC7A0M8Q6 106 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 PMS2P5A8MQ11 134 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 FCN1O00602 326 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 IGHEP01854 428 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 EGR1P18146 543 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 SRD5A2P31213 254 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 HINT1P49773 126 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 COLCA1Q6ZS62 124 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 C19orf35Q6ZS72 473 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 ZDHHC23Q8IYP9 409 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 CLDN23Q96B33 292 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 FOXB1Q99853 325 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 FAM103A1Q9BTL3 118 aaKnown RBP8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 SFXN3Q9BWM7 321 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 QTRT1Q9BXR0 403 aaKnown RBP8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 NPCDR1Q9BY65 106 aa8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 SEPSECSQ9HD40 501 aaKnown RBP8.7□□□□□ -1.02
CHRNA1-202ENST00000348749 EML6Q6ZMW3 1958 aa8.69□□□□□ -1.02
CHRNA1-202ENST00000348749 IGHV3-15A0A0B4J1V0 119 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms