RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 C9orf172C9J069 976 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 AGFG2O95081 481 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 HPRT1P00492 218 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 AARDQ4LEZ3 155 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 REC114Q7Z4M0 266 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 FDCSPQ8NFU4 85 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 RAB24Q969Q5 203 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 UMODP07911 640 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 OPRK1P41145 380 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 GAMTQ14353 236 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 TMEM45BQ96B21 275 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 ASCC3Q8N3C0 2202 aaKnown RBP12.56□□□□□ -0.4
NUP50-201ENST00000347635 ZNF253O75346 499 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 TCL1AP56279 114 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 MRPS11P82912 194 aaKnown RBP12.56□□□□□ -0.4
NUP50-201ENST00000347635 LINC00470Q9BZP3 86 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 C3orf80F5H4A9 247 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 RAB29O14966 203 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 NDUFA2O43678 99 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 MPDU1O75352 247 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 LRRC75BQ2VPJ9 315 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 ASCL5Q7RTU5 278 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 OR1L1Q8NH94 360 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 HES7Q9BYE0 225 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 ZNF552Q9H707 407 aaPredicted RBP12.56□□□□□ -0.4
NUP50-201ENST00000347635 FOXD3Q9UJU5 478 aaPredicted RBP12.56□□□□□ -0.4
NUP50-201ENST00000347635 TIMM9Q9Y5J7 89 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 PXMP4Q9Y6I8 212 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 ALPK2Q86TB3 2170 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 HELTA6NFD8 242 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 ZNF25P17030 456 aaPredicted RBP12.56□□□□□ -0.4
NUP50-201ENST00000347635 PAFAH1B2P68402 229 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 MESP1Q9BRJ9 268 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 C1QTNF5Q9BXJ0 243 aa12.56□□□□□ -0.4
NUP50-201ENST00000347635 ZNF703Q9H7S9 590 aaPredicted RBP12.56□□□□□ -0.4
NUP50-201ENST00000347635 ZNF729A6NN14 1252 aaPredicted RBP12.55□□□□□ -0.4
NUP50-201ENST00000347635 CNIH1O95406 144 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 HEPN1Q6WQI6 88 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 TXNDC17Q9BRA2 123 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 HES4Q9HCC6 221 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 PNRC2Q9NPJ4 139 aaKnown RBP12.55□□□□□ -0.4
NUP50-201ENST00000347635 J3QW42 95 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 ZG16O60844 167 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 CLDN14O95500 239 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 USF1P22415 310 aaPredicted RBP12.55□□□□□ -0.4
NUP50-201ENST00000347635 UBE2L3P68036 154 aaKnown RBP12.55□□□□□ -0.4
NUP50-201ENST00000347635 STUMQ69YW2 141 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 AGAP20933 346 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 NPY1RP25929 384 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 ELOBQ15370 118 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 RNF151Q2KHN1 245 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 DRAM1Q8N682 238 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 RNF2Q99496 336 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 RP1L1Q8IWN7 2480 aaPredicted RBP12.55□□□□□ -0.4
NUP50-201ENST00000347635 A0A1B0GV90 55 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 TMEM250H0YL14 139 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 CCL20P78556 96 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 VAMP3Q15836 100 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 LBHQ53QV2 105 aaPredicted RBP12.55□□□□□ -0.4
NUP50-201ENST00000347635 RNF7Q9UBF6 113 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 CLDN16Q9Y5I7 305 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 CT45A10P0DMU9 189 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 VN1R17PQ8TDU5 208 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 IL36RNQ9UBH0 155 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 ZDHHC8Q9ULC8 765 aa12.55□□□□□ -0.4
NUP50-201ENST00000347635 IFNL4K9M1U5 179 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 PPIHO43447 177 aaKnown RBP12.54□□□□□ -0.4
NUP50-201ENST00000347635 SLC25A5P05141 298 aaKnown RBP12.54□□□□□ -0.4
NUP50-201ENST00000347635 CEBPDP49716 269 aaPredicted RBP12.54□□□□□ -0.4
NUP50-201ENST00000347635 VMA21Q3ZAQ7 101 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 ATP1A1-AS1Q5TC04 95 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 LRP11Q86VZ4 500 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 TPRX1Q8N7U7 411 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 TP53BP1Q12888 1972 aaPredicted RBP12.54□□□□□ -0.4
NUP50-201ENST00000347635 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 MST1LQ2TV78 715 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 SDF2L1Q9HCN8 221 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 PAM16Q9Y3D7 125 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 MDC1Q14676 2089 aaKnown RBP12.54□□□□□ -0.4
NUP50-201ENST00000347635 S1PR2O95136 353 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 RFPL3SP0C7P2 107 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 SPCS3P61009 180 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 Q6ZN92 141 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 LINC00469Q8N7U9 141 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 CCL17Q92583 94 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 AKIRIN1Q9H9L7 192 aaPredicted RBP12.54□□□□□ -0.4
NUP50-201ENST00000347635 UCP2P55851 309 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 TIPARPQ7Z3E1 657 aaKnown RBP12.54□□□□□ -0.4
NUP50-201ENST00000347635 NPVFQ9HCQ7 196 aa12.54□□□□□ -0.4
NUP50-201ENST00000347635 A0A1B0GW64 132 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 TNFSF10P50591 281 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 PRNDQ9UKY0 176 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 AMMECR1Q9Y4X0 333 aaPredicted RBP12.53□□□□□ -0.4
NUP50-201ENST00000347635 ZNF106Q9H2Y7 1883 aaKnown RBP12.53□□□□□ -0.4
NUP50-201ENST00000347635 SAP30LQ9HAJ7 183 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 ZNF355PQ9NSJ1 428 aa12.53□□□□□ -0.4
NUP50-201ENST00000347635 GNB2P62879 340 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms