RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 TCF15Q12870 199 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 MOB3BQ86TA1 216 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 SMIM7Q9BQ49 75 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 MAP1LC3BQ9GZQ8 125 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 A0A1W2PPQ1 181 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 TUBAL3A6NHL2 446 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 DVL1O14640 695 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 CEACAM1P13688 526 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 ZNF273Q14593 569 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 ACSM6Q6P461 480 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 SPACA3Q8IXA5 215 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 CLRN3Q8NCR9 226 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 REG4Q9BYZ8 158 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 ONECUT1Q9UBC0 465 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 FBLN5Q9UBX5 448 aa11.17□□□□□ -0.62
CASC4-202ENST00000345795 MARCH11A6NNE9 402 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 CYB5BO43169 146 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 PPIHO43447 177 aaKnown RBP11.16□□□□□ -0.62
CASC4-202ENST00000345795 SPP1P10451 314 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 DHODHQ02127 395 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 ZNF429Q86V71 674 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 RBKSQ9H477 322 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 SIRT7Q9NRC8 400 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 RPRMQ9NS64 109 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.16□□□□□ -0.62
CASC4-202ENST00000345795 DFFBO76075 338 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 RHEBQ15382 184 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 WDR25Q64LD2 544 aaPredicted RBP11.16□□□□□ -0.62
CASC4-202ENST00000345795 PRSS33Q8NF86 280 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 SPRY4Q9C004 299 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 ZNF462Q96JM2 2506 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 JMJD1CQ15652 2540 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 IGHV3-35A0A0C4DH35 117 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 OR5G3P0C626 314 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 COL8A2P25067 703 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 WDR31Q8NA23 367 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 PHYHIPLQ96FC7 376 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 QTRT1Q9BXR0 403 aaKnown RBP11.16□□□□□ -0.62
CASC4-202ENST00000345795 EGLN1Q9GZT9 426 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 RNF7Q9UBF6 113 aa11.16□□□□□ -0.62
CASC4-202ENST00000345795 CDS2O95674 445 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 PGA5P0DJD9 388 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 DVL1P1P54792 670 aaPredicted RBP11.15□□□□□ -0.62
CASC4-202ENST00000345795 HCP5Q6MZN7 132 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 GLRX5Q86SX6 157 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 CD177Q8N6Q3 437 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 SMG1Q96Q15 3661 aaKnown RBP11.15□□□□□ -0.62
CASC4-202ENST00000345795 TRAV3A0A0B4J244 114 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 RBFOX3A6NFN3 312 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 SLC31A2O15432 143 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 NAT1P18440 290 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 DBX2Q6ZNG2 339 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 DNM1P46Q6ZS02 220 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 FOXL2NBQ6ZUU3 175 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 EDARADDQ8WWZ3 215 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 CACFD1Q9UGQ2 172 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 DYSFO75923 2080 aa11.15□□□□□ -0.62
CASC4-202ENST00000345795 DBX1A6NMT0 343 aa11.15□□□□□ -0.63
CASC4-202ENST00000345795 CNIH1O95406 144 aa11.15□□□□□ -0.63
CASC4-202ENST00000345795 TFF3Q07654 80 aa11.15□□□□□ -0.63
CASC4-202ENST00000345795 P2RY6Q15077 328 aa11.15□□□□□ -0.63
CASC4-202ENST00000345795 UTF1Q5T230 341 aa11.15□□□□□ -0.63
CASC4-202ENST00000345795 GATAD1Q8WUU5 269 aa11.15□□□□□ -0.63
CASC4-202ENST00000345795 SMCO4Q9NRQ5 59 aa11.15□□□□□ -0.63
CASC4-202ENST00000345795 CLCF1Q9UBD9 225 aa11.15□□□□□ -0.63
CASC4-202ENST00000345795 HILPDAQ9Y5L2 63 aa11.15□□□□□ -0.63
CASC4-202ENST00000345795 OR10J4P0C629 311 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 ADCYAP1P18509 176 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 KITLGP21583 273 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 SULT1A2P50226 295 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 SLC35B1P78383 322 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 PRR27Q6MZM9 219 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 BTNL8Q6UX41 500 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 SLC16A13Q7RTY0 426 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 OR10G4Q8NGN3 311 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 OR10G9Q8NGN4 311 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 OR10G7Q8NGN6 311 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 LILRB1Q8NHL6 650 aaPredicted RBP11.14□□□□□ -0.63
CASC4-202ENST00000345795 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 ZNF355PQ9NSJ1 428 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 IGHV3OR16-8A0A075B7F1 116 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 NKX6-3A6NJ46 265 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 A8MXK9 166 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 H0Y980 276 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 SS18L1O75177 396 aaPredicted RBP11.14□□□□□ -0.63
CASC4-202ENST00000345795 NAPSAO96009 420 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 MGST1P10620 155 aaKnown RBP11.14□□□□□ -0.63
CASC4-202ENST00000345795 CD40P25942 277 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 GRNP28799 593 aaKnown RBP11.14□□□□□ -0.63
CASC4-202ENST00000345795 CHRNB4P30926 498 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 FAM216AQ8WUB2 273 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 COQ2Q96H96 371 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 MEGF10Q96KG7 1140 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 ATP5SQ99766 215 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 SULT1A1P50225 295 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 RND3P61587 244 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 IL34Q6ZMJ4 242 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 COLCA1Q6ZS62 124 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 SPSB4Q96A44 273 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 GNPNAT1Q96EK6 184 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms