RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 LOC101059948A0A1B0GTJ6 334 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 EREGO14944 169 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 ZNF385AQ96PM9 386 aaKnown RBP10.41□□□□□ -0.74
COL12A1-202ENST00000345356 SIGMAR1Q99720 223 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 PGPA6NDG6 321 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 C4orf51C9J302 202 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 GCHFRP30047 84 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 LRRC75BQ2VPJ9 315 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 RASL11BQ9BPW5 248 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 LHFPL6Q9Y693 200 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 PLAUP00749 431 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 IL4P05112 153 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 SRD5A2P31213 254 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 HOXA4Q00056 320 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-202ENST00000345356 KRTCAP3Q53RY4 240 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 ZNF664Q8N3J9 261 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 TMEM189A5PLL7 270 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 PPIAL4DF5H284 164 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 MST1P26927 711 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 HILPDAQ9Y5L2 63 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 HOXC4P09017 264 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-202ENST00000345356 HYAL1Q12794 435 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 GPR35Q9HC97 309 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 THYN1Q9P016 225 aa10.41□□□□□ -0.74
COL12A1-202ENST00000345356 K7N7A8 449 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 GPR183P32249 361 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 SFTPA1Q8IWL2 248 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 ZNF645Q8N7E2 425 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 TIMD4Q96H15 378 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 HARBI1Q96MB7 349 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 CYTL1Q9NRR1 136 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 AMMECR1Q9Y4X0 333 aaPredicted RBP10.4□□□□□ -0.74
COL12A1-202ENST00000345356 TRBV24-1A0A075B6N3 115 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 SHISA7A6NL88 538 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 DNPH1O43598 174 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 MGPP08493 103 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 ERGP11308 486 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 ATP5G3P48201 142 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 HBBP68871 147 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 SMAGPQ0VAQ4 97 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 WFDC8Q8IUA0 241 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 OR1L8Q8NGR8 309 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 RASL10BQ96S79 203 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 C19orf67A6NJJ6 358 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 IGHV2-70P01814 119 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 SSTR5P35346 364 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 FAM169BQ8N8A8 192 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 MYO7AQ13402 2215 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 SARAFQ96BY9 339 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 SGK494Q96LW2 274 aa10.4□□□□□ -0.74
COL12A1-202ENST00000345356 TRAV9-2A0A087WT02 112 aa10.4□□□□□ -0.75
COL12A1-202ENST00000345356 SCO2A0A1W2PP80 73 aa10.4□□□□□ -0.75
COL12A1-202ENST00000345356 MS4A18H0YCH9 400 aa10.4□□□□□ -0.75
COL12A1-202ENST00000345356 HYPMO75409 117 aa10.4□□□□□ -0.75
COL12A1-202ENST00000345356 ZNF735P0CB33 412 aa10.4□□□□□ -0.75
COL12A1-202ENST00000345356 MS4A18Q3C1V0 323 aa10.4□□□□□ -0.75
COL12A1-202ENST00000345356 ZNF418Q8TF45 676 aaPredicted RBP10.4□□□□□ -0.75
COL12A1-202ENST00000345356 FAM131CQ96AQ9 280 aa10.4□□□□□ -0.75
COL12A1-202ENST00000345356 TM4SF19Q96DZ7 209 aa10.4□□□□□ -0.75
COL12A1-202ENST00000345356 IGHV3-21A0A0B4J1V1 117 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 ZIC3O60481 467 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 TDGF1P3P51864 188 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 ASPHD2Q6ICH7 369 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 NPCDR1Q9BY65 106 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 ATAD5Q96QE3 1844 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 TRAV9-1A0A075B6T8 112 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 LYZL6O75951 148 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 COX6CP09669 75 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 GABRG2P18507 467 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 TNFRSF1AP19438 455 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM27BQ5VT28 67 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 AMMECR1LQ6DCA0 310 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 UNQ5815/PRO19632Q6UWF5 114 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 LPAR2Q9HBW0 351 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 CXCL10P02778 98 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 C8orf88P0DMB2 117 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 CEACAM21Q3KPI0 293 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 ACSF3Q4G176 576 aaPredicted RBP10.39□□□□□ -0.75
COL12A1-202ENST00000345356 ZNF721Q8TF20 911 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 ZNF414Q96IQ9 312 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 HIGD1AQ9Y241 93 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 R4GN57 208 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A10PA6NDY2 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A18PA6NE21 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A16PA6NEW6 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A20PA6NIJ5 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A8PA6NJQ4 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A7PA6NKC0 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A22PA8MWA6 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A12PA8MX19 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A5PA8MXJ8 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A23PA8MXZ1 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FOXS1O43638 330 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 TSPAN2O60636 221 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A15PP0C7V4 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A13PP0C7W8 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A14PP0C7W9 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 FAM90A24PP0C7X0 464 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 APELAP0DMC3 54 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 C5orf30Q96GV9 206 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms